RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 A0A0G2JMM0 328 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 A0A1W2PPB8 328 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 A0A1W2PRS3 328 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 KIR3DP1A8MWS1 328 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 J3KTA2 159 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 FFAR1O14842 300 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 GMFGO60234 142 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 OR10H3O60404 316 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 TPST2O60704 377 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 DIRAS1O95057 198 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 ADAP00813 363 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 PEPDP12955 493 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 GTF2E2P29084 291 aaKnown RBP11.71□□□□□ -0.53
TRIM47-202ENST00000585333 ST13P50502 369 aaKnown RBP11.71□□□□□ -0.53
TRIM47-202ENST00000585333 UGT2B15P54855 530 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 NUP107P57740 925 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 CSNK2A1P68400 391 aaPredicted RBP11.71□□□□□ -0.53
TRIM47-202ENST00000585333 COX10Q12887 443 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 TMEM44Q2T9K0 475 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 RPL13AP3Q6NVV1 102 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 LINC00114Q6XXX2 140 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 PM20D2Q8IYS1 436 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 MEIOBQ8N635 442 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 ICA1LQ8NDH6 482 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 SLC7A13Q8TCU3 470 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 ZHX1-C8orf76Q96EF9 292 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 UBL7Q96S82 380 aaPredicted RBP11.71□□□□□ -0.53
TRIM47-202ENST00000585333 PKP2Q99959 881 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 RBM4BQ9BQ04 359 aaKnown RBP11.71□□□□□ -0.53
TRIM47-202ENST00000585333 RBM4Q9BWF3 364 aaKnown RBP11.71□□□□□ -0.53
TRIM47-202ENST00000585333 TAPBPLQ9BX59 468 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 RSPO3Q9BXY4 272 aaPredicted RBP11.71□□□□□ -0.53
TRIM47-202ENST00000585333 CTPS2Q9NRF8 586 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 PKD1L2Q7Z442 2459 aa11.71□□□□□ -0.53
TRIM47-202ENST00000585333 ZFYVE26Q68DK2 2539 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 TRGV5A0A0B4J1U4 118 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 SH3PXD2BA1X283 911 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 OR2M5A3KFT3 312 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 OR14I1A6ND48 311 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 FAM166BA8MTA8 275 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 CASQ2O14958 399 aaPredicted RBP11.7□□□□□ -0.54
TRIM47-202ENST00000585333 ZIC3O60481 467 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 ADAM11O75078 769 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 HPRP00739 348 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 IGHG3P01860 377 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 PDGFAP04085 211 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 POU3F2P20265 443 aaPredicted RBP11.7□□□□□ -0.54
TRIM47-202ENST00000585333 MAGEA5P43359 124 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 LIMS1P48059 325 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 SLC9A3P48764 834 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 CD97P48960 835 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 RAD23AP54725 363 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 CTBP2P56545 445 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 RPS3AP61247 264 aaKnown RBP11.7□□□□□ -0.54
TRIM47-202ENST00000585333 TRIP10Q15642 601 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 TOMM34Q15785 309 aaPredicted RBP11.7□□□□□ -0.54
TRIM47-202ENST00000585333 EXOC3L2Q2M3D2 409 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 SYT14P1Q58G82 188 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 NHSL2Q5HYW2 709 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 FAM69AQ5T7M9 428 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 ARHGAP11AQ6P4F7 1023 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 PODNL1Q6PEZ8 512 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 ESPNLQ6ZVH7 1005 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 TSEN54Q7Z6J9 526 aaKnown RBP11.7□□□□□ -0.54
TRIM47-202ENST00000585333 AMIGO2Q86SJ2 522 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 ATG16L2Q8NAA4 619 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 OR10G2Q8NGC3 310 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 OR4K5Q8NGD3 323 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 OR52J3Q8NH60 311 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 NEIL3Q8TAT5 605 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 SARAFQ96BY9 339 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 RDH12Q96NR8 316 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 WFDC6Q9BQY6 131 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 TEX12Q9BXU0 123 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 GABARAPL1Q9H0R8 117 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 ZNF71Q9NQZ8 489 aaPredicted RBP11.7□□□□□ -0.54
TRIM47-202ENST00000585333 PDP1Q9P0J1 537 aaPredicted RBP11.7□□□□□ -0.54
TRIM47-202ENST00000585333 RHCGQ9UBD6 479 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 LHX6Q9UPM6 363 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 TRAPPC4Q9Y296 219 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 CORINQ9Y5Q5 1042 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 U3KQV3 271 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 NINQ8N4C6 2090 aa11.7□□□□□ -0.54
TRIM47-202ENST00000585333 PINLYPA6NC86 204 aa11.69□□□□□ -0.54
TRIM47-202ENST00000585333 EIF1BO60739 113 aaKnown RBP11.69□□□□□ -0.54
TRIM47-202ENST00000585333 SEMA7AO75326 666 aa11.69□□□□□ -0.54
TRIM47-202ENST00000585333 HIST1H2ABP04908 130 aa11.69□□□□□ -0.54
TRIM47-202ENST00000585333 RFPL3SP0C7P2 107 aa11.69□□□□□ -0.54
TRIM47-202ENST00000585333 TFPIP10646 304 aa11.69□□□□□ -0.54
TRIM47-202ENST00000585333 IDUAP35475 653 aa11.69□□□□□ -0.54
TRIM47-202ENST00000585333 INPP5JQ15735 1006 aaPredicted RBP11.69□□□□□ -0.54
TRIM47-202ENST00000585333 SNCBQ16143 134 aa11.69□□□□□ -0.54
TRIM47-202ENST00000585333 PLEKHN1Q494U1 663 aaPredicted RBP11.69□□□□□ -0.54
TRIM47-202ENST00000585333 ZBTB49Q6ZSB9 765 aa11.69□□□□□ -0.54
TRIM47-202ENST00000585333 HIST3H2AQ7L7L0 130 aa11.69□□□□□ -0.54
TRIM47-202ENST00000585333 CHMP1BQ7LBR1 199 aa11.69□□□□□ -0.54
TRIM47-202ENST00000585333 MAMDC2Q7Z304 686 aaPredicted RBP11.69□□□□□ -0.54
TRIM47-202ENST00000585333 STK32CQ86UX6 486 aa11.69□□□□□ -0.54
TRIM47-202ENST00000585333 ADGRG3Q86Y34 549 aa11.69□□□□□ -0.54
TRIM47-202ENST00000585333 LILRA2Q8N149 483 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms