RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 PIP4P1Q86T03 277 aa13.79□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ARIH2OSQ8N7S6 290 aa13.79□□□□□ -0.2
CDK5RAP3-236ENST00000584991 OR2T33Q8NG76 320 aa13.79□□□□□ -0.2
CDK5RAP3-236ENST00000584991 RIT1Q92963 219 aa13.79□□□□□ -0.2
CDK5RAP3-236ENST00000584991 CTHRC1Q96CG8 243 aa13.79□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ST6GAL2Q96JF0 529 aa13.79□□□□□ -0.2
CDK5RAP3-236ENST00000584991 CMKLR1Q99788 373 aa13.79□□□□□ -0.2
CDK5RAP3-236ENST00000584991 TMEM165Q9HC07 324 aa13.79□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ADAP2Q9NPF8 381 aa13.79□□□□□ -0.2
CDK5RAP3-236ENST00000584991 TIGARQ9NQ88 270 aa13.79□□□□□ -0.2
CDK5RAP3-236ENST00000584991 TOR4AQ9NXH8 423 aa13.79□□□□□ -0.2
CDK5RAP3-236ENST00000584991 AKAP7Q9P0M2 348 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-236ENST00000584991 CTSFQ9UBX1 484 aa13.79□□□□□ -0.2
CDK5RAP3-236ENST00000584991 CARD8Q9Y2G2 431 aa13.79□□□□□ -0.2
CDK5RAP3-236ENST00000584991 MMACHCQ9Y4U1 282 aa13.79□□□□□ -0.2
CDK5RAP3-236ENST00000584991 A0A087WV62 115 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 SLC19A2O60779 497 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 IFNA16P05015 189 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 DCDP81605 110 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 FABP5Q01469 135 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 MAP4K2Q12851 820 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 SERTAD2Q14140 314 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 EXOSC7Q15024 291 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 TRAM1Q15629 374 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 TRIP6Q15654 476 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 PGGHGQ32M88 737 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 NKAIN1Q4KMZ8 207 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ZMAT1Q5H9K5 638 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ZNF620Q6ZNG0 422 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 GALNT12Q8IXK2 581 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 DUSP18Q8NEJ0 188 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 BRIX1Q8TDN6 353 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 DNAJA4Q8WW22 397 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 CAPSLQ8WWF8 208 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 TSLPQ969D9 159 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 PMEPA1Q969W9 287 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 FAM46AQ96IP4 442 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 FRMD6Q96NE9 622 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 MCHR1Q99705 422 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 STRADBQ9C0K7 418 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 KCNN2Q9H2S1 579 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 TP63Q9H3D4 680 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 INPP5EQ9NRR6 644 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 SLC39A1Q9NY26 324 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 KCNE3Q9Y6H6 103 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 CPNE3O75131 537 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ZNF28P17035 718 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 EVX1P49640 407 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 EFNA3P52797 238 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 SF3B4Q15427 424 aaKnown RBP eCLIP13.78□□□□□ -0.22e-8■■■■□ 19.3
CDK5RAP3-236ENST00000584991 PYDC2Q56P42 97 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ZNF385CQ66K41 422 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 TYW3Q6IPR3 259 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 MFSD12Q6NUT3 480 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ZCCHC12Q6PEW1 402 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 PLEKHM3Q6ZWE6 761 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 GDF7Q7Z4P5 450 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 VRK2Q86Y07 508 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 TMEM203Q969S6 136 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 SLC35A4Q96G79 324 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 SLC41A3Q96GZ6 507 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 NEDD4LQ96PU5 975 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ZNF649Q9BS31 505 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 PPP1R3EQ9H7J1 279 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 RNF121Q9H920 327 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 CHST2Q9Y4C5 530 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 LOXL2Q9Y4K0 774 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 PCDHGA1Q9Y5H4 931 aa13.78□□□□□ -0.2
CDK5RAP3-236ENST00000584991 EP300Q09472 2414 aaPredicted RBP13.77□□□□□ -0.2
CDK5RAP3-236ENST00000584991 CPSF4LA6NMK7 179 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 J3QRE1 110 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 HRKO00198 91 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 CASKO14936 926 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 SSX4O60224 188 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 FMO6PO60774 539 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 RORAP35398 523 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 FOXL2P58012 376 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 BIKQ13323 160 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ISXQ2M1V0 245 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 CDCP2Q5VXM1 449 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TIGD3Q6B0B8 471 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 DHRS13Q6UX07 377 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 FRRS1Q6ZNA5 592 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 SHISA6Q6ZSJ9 500 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 RANBP3LQ86VV4 465 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 LIX1LQ8IVB5 337 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 SLC43A2Q8N370 569 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 C19orf18Q8NEA5 215 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 DEFB124Q8NES8 71 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 STT3BQ8TCJ2 826 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 SLC7A6Q92536 515 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 KCTD12Q96CX2 325 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 UBL7Q96S82 380 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 PNO1Q9NRX1 252 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 MKL2Q9ULH7 1088 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 CBLCQ9ULV8 474 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 SATB2Q9UPW6 733 aa13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ZNF443Q9Y2A4 671 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-236ENST00000584991 IGKV3D-11A0A0A0MRZ8 115 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms