RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 CHP2O43745 196 aa12.6□□□□□ -0.39
SRSF1-205ENST00000582730 SERPINI2O75830 405 aa12.6□□□□□ -0.39
SRSF1-205ENST00000582730 NCR1O76036 304 aa12.6□□□□□ -0.39
SRSF1-205ENST00000582730 TBXA2RP21731 343 aa12.6□□□□□ -0.39
SRSF1-205ENST00000582730 CCR4P51679 360 aa12.6□□□□□ -0.39
SRSF1-205ENST00000582730 TATDN3Q17R31 274 aa12.6□□□□□ -0.39
SRSF1-205ENST00000582730 NPSR1Q6W5P4 371 aa12.6□□□□□ -0.39
SRSF1-205ENST00000582730 MEPCEQ7L2J0 689 aaKnown RBP12.6□□□□□ -0.39
SRSF1-205ENST00000582730 SLC37A3Q8NCC5 494 aa12.6□□□□□ -0.39
SRSF1-205ENST00000582730 KATNB1Q9BVA0 655 aa12.6□□□□□ -0.39
SRSF1-205ENST00000582730 ALG8Q9BVK2 526 aa12.6□□□□□ -0.39
SRSF1-205ENST00000582730 FOXQ1Q9C009 403 aa12.6□□□□□ -0.39
SRSF1-205ENST00000582730 SPRTNQ9H040 489 aaPredicted RBP12.6□□□□□ -0.39
SRSF1-205ENST00000582730 DNAJB12Q9NXW2 375 aaKnown RBP12.6□□□□□ -0.39
SRSF1-205ENST00000582730 MALT1Q9UDY8 824 aa12.6□□□□□ -0.39
SRSF1-205ENST00000582730 SPEF1Q9Y4P9 236 aa12.6□□□□□ -0.39
SRSF1-205ENST00000582730 IGHV5-51A0A0C4DH38 117 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 HCN1O60741 890 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 FMO6PO60774 539 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 PRAMEF2O60811 474 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 CSTAP01040 98 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 DRD5P21918 477 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 UQCRC1P31930 480 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 RPL6Q02878 288 aaKnown RBP12.59□□□□□ -0.39
SRSF1-205ENST00000582730 CRMP1Q14194 572 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 PYDC2Q56P42 97 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 GARNL3Q5VVW2 1013 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 ZNF322Q6U7Q0 402 aaPredicted RBP12.59□□□□□ -0.39
SRSF1-205ENST00000582730 ZNF595Q8IYB9 648 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 C16orf52Q8NHV5 167 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 NEIL3Q8TAT5 605 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 VSTM2LQ96N03 204 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.59□□□□□ -0.39
SRSF1-205ENST00000582730 TEKT2Q9UIF3 430 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 KLHL21Q9UJP4 597 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 FBXL4Q9UKA2 621 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 LAMA1P25391 3075 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 LRRN3E7EW58 273 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 SMLR1H3BR10 107 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 OR2B3O76000 313 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 UBL4AP11441 157 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 NME1P15531 152 aaKnown RBP12.59□□□□□ -0.39
SRSF1-205ENST00000582730 CD27P26842 260 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 TNK1Q13470 666 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 DDI2Q5TDH0 399 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 LNX2Q8N448 690 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 OR51Q1Q8NH59 317 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 LMF2Q9BU23 707 aaKnown RBP12.59□□□□□ -0.39
SRSF1-205ENST00000582730 PHF7Q9BWX1 381 aaPredicted RBP12.59□□□□□ -0.39
SRSF1-205ENST00000582730 LRRN3Q9H3W5 708 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 PDE7BQ9NP56 450 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 SLC2A4RGQ9NR83 387 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 POLE3Q9NRF9 147 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 PNO1Q9NRX1 252 aaKnown RBP12.59□□□□□ -0.39
SRSF1-205ENST00000582730 KCNN3Q9UGI6 736 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 FBXL21Q9UKT6 434 aa12.59□□□□□ -0.39
SRSF1-205ENST00000582730 EXOGQ9Y2C4 368 aaKnown RBP12.59□□□□□ -0.39
SRSF1-205ENST00000582730 TMEM184BQ9Y519 407 aaPredicted RBP12.59□□□□□ -0.39
SRSF1-205ENST00000582730 SPAG17Q6Q759 2223 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 GABRPO00591 440 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 SEC14L5O43304 696 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 HRO43593 1189 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 NOS1APO75052 506 aaPredicted RBP12.58□□□□□ -0.4
SRSF1-205ENST00000582730 GXYLT1Q4G148 440 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.58□□□□□ -0.4
SRSF1-205ENST00000582730 PLET1Q6UQ28 207 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 KIRREL2Q6UWL6 708 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 TMPRSS11FQ6ZWK6 438 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 ABCA7Q8IZY2 2146 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 ARHGEF39Q8N4T4 335 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 GDPD1Q8N9F7 314 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 OR6C4Q8NGE1 309 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 OR51L1Q8NGJ5 315 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 OR4C3Q8NH37 302 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 AHCYL2Q96HN2 611 aaKnown RBP12.58□□□□□ -0.4
SRSF1-205ENST00000582730 LMF1Q96S06 567 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 TRIM2Q9C040 744 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 OR10A5Q9H207 317 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 PLEKHB1Q9UF11 243 aaPredicted RBP12.58□□□□□ -0.4
SRSF1-205ENST00000582730 PLCL2Q9UPR0 1127 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 ALG5Q9Y673 324 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 MYO15AQ9UKN7 3530 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 RHPN2P1A8MT19 583 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 GMFGO60234 142 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 NSA2O95478 260 aaKnown RBP12.58□□□□□ -0.4
SRSF1-205ENST00000582730 IGHA1P01876 353 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 C1QBP02746 253 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 HLA-DPB1P04440 258 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 NGFRP08138 427 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 ZNF3P17036 446 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 M6PRP20645 277 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 NUDT1P36639 197 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 ACAA2P42765 397 aaKnown RBP12.58□□□□□ -0.4
SRSF1-205ENST00000582730 OR1D4P47884 311 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 FASLGP48023 281 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 LAMTOR1Q6IAA8 161 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 RPL13AP3Q6NVV1 102 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 ARL9Q6T311 187 aa12.58□□□□□ -0.4
SRSF1-205ENST00000582730 FAM98AQ8NCA5 519 aaKnown RBP12.58□□□□□ -0.4
SRSF1-205ENST00000582730 MSANTD3Q96H12 275 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms