RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 IL20Q9NYY1 176 aa8.51□□□□□ -1.05
SS18-220ENST00000582092 PADI1Q9ULC6 663 aa8.51□□□□□ -1.05
SS18-220ENST00000582092 NPFFR2Q9Y5X5 522 aa8.51□□□□□ -1.05
SS18-220ENST00000582092 DMXL2Q8TDJ6 3036 aa8.51□□□□□ -1.05
SS18-220ENST00000582092 OR6C70A6NIJ9 312 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.5□□□□□ -1.05
SS18-220ENST00000582092 ERVH48-1M5A8F1 160 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 PRKYO43930 277 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 GMFGO60234 142 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 TSPAN2O60636 221 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 INMTO95050 263 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 RAB36O95755 333 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 BCL10O95999 233 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 NGFRP08138 427 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 PIPP12273 146 aaPredicted RBP8.5□□□□□ -1.05
SS18-220ENST00000582092 CCL4P13236 92 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 NAGAP17050 411 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 GABRB1P18505 474 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 PAX7P23759 505 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 DCKP27707 260 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 ABCD3P28288 659 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 ETV5P41161 510 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 SLC9A3P48764 834 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 CLK1P49759 484 aaKnown RBP8.5□□□□□ -1.05
SS18-220ENST00000582092 SLC16A1P53985 500 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 SLC26A5P58743 744 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 CLN3Q13286 438 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 MED22Q15528 200 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 EXT1Q16394 746 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 TIGD6Q17RP2 521 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 BTBD16Q32M84 506 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 NDUFAF6Q330K2 333 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 TMEM201Q5SNT2 666 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 SLC25A30Q5SVS4 291 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 NUP210LQ5VU65 1888 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 XAF1Q6GPH4 301 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 LAIR2Q6ISS4 152 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 SLC30A6Q6NXT4 461 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 KIRREL2Q6UWL6 708 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 C6orf15Q6UXA7 325 aaPredicted RBP8.5□□□□□ -1.05
SS18-220ENST00000582092 ZNF620Q6ZNG0 422 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 ZNF367Q7RTV3 350 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 NUP54Q7Z3B4 507 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 MARCH3Q86UD3 253 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 KIF18BQ86Y91 864 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 GID4Q8IVV7 300 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 CCDC103Q8IW40 242 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 GALNT6Q8NCL4 622 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 ANKK1Q8NFD2 765 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 OR5M3Q8NGP4 307 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 OR8K3Q8NH51 312 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 OR51A7Q8NH64 312 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 NUBPLQ8TB37 319 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 BRIX1Q8TDN6 353 aaKnown RBP8.5□□□□□ -1.05
SS18-220ENST00000582092 FAR1Q8WVX9 515 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 TMEM234Q8WY98 164 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 SGCDQ92629 289 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 ZNF582Q96NG8 517 aaPredicted RBP8.5□□□□□ -1.05
SS18-220ENST00000582092 GPA33Q99795 319 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 BCL7BQ9BQE9 202 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 SLC19A3Q9BZV2 496 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 LIN28AQ9H9Z2 209 aaKnown RBP8.5□□□□□ -1.05
SS18-220ENST00000582092 PAK1IP1Q9NWT1 392 aaPredicted RBP8.5□□□□□ -1.05
SS18-220ENST00000582092 FLRT3Q9NZU0 649 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 CACNA1GO43497 2377 aa8.5□□□□□ -1.05
SS18-220ENST00000582092 A0A087WUJ7 227 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 PMS2P1A4D2B8 440 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 ENO4A6NNW6 628 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 C9orf172C9J069 976 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 ALG1L2C9J202 215 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 PRR23D1E9PI22 279 aaPredicted RBP8.49□□□□□ -1.05
SS18-220ENST00000582092 K7ENP7 123 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 WWP2O00308 870 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 TP53I11O14683 189 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 PRODHO43272 600 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 AHCYL1O43865 530 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 NDUFB2O95178 105 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 THY1P04216 161 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 HTR1AP08908 422 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 PRR23D2P0DMB1 279 aaPredicted RBP8.49□□□□□ -1.05
SS18-220ENST00000582092 DBTP11182 482 aaKnown RBP8.49□□□□□ -1.05
SS18-220ENST00000582092 ZNF3P17036 446 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 FUT1P19526 365 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 MAKP20794 623 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 PCMT1P22061 227 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 ACVR2AP27037 513 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 EVI2BP34910 448 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 SLC1A3P43003 542 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 HTR3AP46098 478 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 SERPINB10P48595 397 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 P2RX1P51575 399 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 MLLT10P55197 1068 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 CDH11P55287 796 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 RPS7P62081 194 aaKnown RBP8.49□□□□□ -1.05
SS18-220ENST00000582092 RPS15P62841 145 aaKnown RBP8.49□□□□□ -1.05
SS18-220ENST00000582092 LGALS3BPQ08380 585 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 C17orf67Q0P5P2 114 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 SKP2Q13309 424 aa8.49□□□□□ -1.05
SS18-220ENST00000582092 DYNC1I2Q13409 638 aaKnown RBP8.49□□□□□ -1.05
SS18-220ENST00000582092 TBCEQ15813 527 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms