RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 NCF2P19878 526 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-220ENST00000581707 KLK2P20151 261 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 CCNA2P20248 432 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 CRYGSP22914 178 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 DNASE1P24855 282 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 SLC1A3P43003 542 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 CLK1P49759 484 aaKnown RBP17.35■□□□□ 0.37
SREBF1-220ENST00000581707 POLR2HP52434 150 aaKnown RBP17.35■□□□□ 0.37
SREBF1-220ENST00000581707 EPS8Q12929 822 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 LARS2Q15031 903 aaKnown RBP17.35■□□□□ 0.37
SREBF1-220ENST00000581707 RPS26P11Q5JNZ5 115 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-220ENST00000581707 PAGE3Q5JUK9 113 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 SPNS3Q6ZMD2 512 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 ZNF836Q6ZNA1 936 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 C22orf34Q6ZV56 151 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 ZC3HAV1LQ96H79 300 aaKnown RBP17.35■□□□□ 0.37
SREBF1-220ENST00000581707 ARL5BQ96KC2 179 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 PSD2Q9BQI7 771 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 OR11A1Q9GZK7 315 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 RABEP2Q9H5N1 569 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 BCO1Q9HAY6 547 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 CACYBPQ9HB71 228 aaKnown RBP17.35■□□□□ 0.37
SREBF1-220ENST00000581707 NPHS2Q9NP85 383 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 A4GALTQ9NPC4 353 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 DCTN4Q9UJW0 460 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 OSGIN1Q9UJX0 560 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 ING1Q9UK53 422 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-220ENST00000581707 ZNF443Q9Y2A4 671 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-220ENST00000581707 TMED7Q9Y3B3 224 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 HDGFL3Q9Y3E1 203 aa17.35■□□□□ 0.37
SREBF1-220ENST00000581707 ITPR3Q14573 2671 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 DEFB108AA8MXU0 73 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 PMS2P2O95744 297 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 THBS1P07996 1170 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 GKN3PP0CG01 181 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 CD1EP15812 388 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 PPP3CBP16298 524 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 PPIBP23284 216 aaKnown RBP17.34■□□□□ 0.37
SREBF1-220ENST00000581707 TACR3P29371 465 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 ZSWIM7Q19AV6 140 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 PAMR1Q6UXH9 720 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 TFAP2EQ6VUC0 442 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 MTDHQ86UE4 582 aaKnown RBP17.34■□□□□ 0.37
SREBF1-220ENST00000581707 MSRB3Q8IXL7 192 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 MAL2Q969L2 176 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 ZHX1-C8orf76Q96EF9 292 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 DNAJA3Q96EY1 480 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 PRDM4Q9UKN5 801 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 GPR52Q9Y2T5 361 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 IFT52Q9Y366 437 aa17.34■□□□□ 0.37
SREBF1-220ENST00000581707 A0A1W2PP18 115 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 A0A1W2PPR1 153 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 SIAH2O43255 324 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 PSMB1P20618 241 aaKnown RBP17.33■□□□□ 0.36
SREBF1-220ENST00000581707 RNF220Q5VTB9 566 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 PRAMEF8Q5VWM4 474 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 PRAMEF7Q5VXH5 474 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 CLIP4Q8N3C7 705 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 ZNF775Q96BV0 537 aaPredicted RBP17.33■□□□□ 0.36
SREBF1-220ENST00000581707 PIK3IP1Q96FE7 263 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 FOXC2Q99958 501 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 SIKE1Q9BRV8 207 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 SPATA9Q9BWV2 254 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 ACTR6Q9GZN1 396 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 ADAM19Q9H013 955 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 ARMC7Q9H6L4 198 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 BCL2L10Q9HD36 194 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 VAPAQ9P0L0 249 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 TRIM33Q9UPN9 1127 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 TRAPPC4Q9Y296 219 aa17.33■□□□□ 0.36
SREBF1-220ENST00000581707 ZNF724A8MTY0 619 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 C5orf58C9J3I9 102 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 ZNF208O43345 1280 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 DNPH1O43598 174 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 PGM3O95394 542 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 RAF1P04049 648 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 THBDP07204 575 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 ACAA2P42765 397 aaKnown RBP17.32■□□□□ 0.36
SREBF1-220ENST00000581707 MAP2K6P52564 334 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 OR2B6P58173 313 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 KEAP1Q14145 624 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 ZNF311Q5JNZ3 666 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 CXorf67Q86X51 503 aaPredicted RBP17.32■□□□□ 0.36
SREBF1-220ENST00000581707 GABRG1Q8N1C3 465 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 BBS10Q8TAM1 723 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 DDIT4LQ96D03 193 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 ZNF300Q96RE9 604 aaPredicted RBP17.32■□□□□ 0.36
SREBF1-220ENST00000581707 HDHD5Q9BXW7 423 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 OR10A4Q9H209 315 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 ZNF446Q9NWS9 450 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 TMEM181Q9P2C4 612 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 GMEB1Q9Y692 573 aa17.32■□□□□ 0.36
SREBF1-220ENST00000581707 PRRC2AP48634 2157 aaKnown RBP17.32■□□□□ 0.36
SREBF1-220ENST00000581707 PRR14LQ5THK1 2151 aa17.31■□□□□ 0.36
SREBF1-220ENST00000581707 TRBV5-3A0A0A0MS03 114 aa17.31■□□□□ 0.36
SREBF1-220ENST00000581707 A0A0G2JND7 137 aa17.31■□□□□ 0.36
SREBF1-220ENST00000581707 TMEM72A0PK05 275 aa17.31■□□□□ 0.36
SREBF1-220ENST00000581707 GCM2O75603 506 aaPredicted RBP17.31■□□□□ 0.36
SREBF1-220ENST00000581707 OR3A2P47893 321 aa17.31■□□□□ 0.36
SREBF1-220ENST00000581707 COPZ1P61923 177 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms