RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 NUDT17P0C025 328 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 TFPIP10646 304 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 PTNP21246 168 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 CD40P25942 277 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 SOAT1P35610 550 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 SLC16A1P53985 500 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 CDH11P55287 796 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 DSCR9P59020 149 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 IRX1P78414 480 aaPredicted RBP9.33□□□□□ -0.92
RFFL-209ENST00000581265 H3F3AP84243 136 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 ELOA3BQ3SY89 546 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 OR4F3Q6IEY1 312 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 OR7E24Q6IFN5 339 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 TYW3Q6IPR3 259 aaKnown RBP9.33□□□□□ -0.92
RFFL-209ENST00000581265 C11orf71Q6IPW1 123 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 KLHL17Q6TDP4 642 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 OLIG3Q7RTU3 272 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 C16orf62Q7Z3J2 963 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 GRINAQ7Z429 371 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 ADGRG3Q86Y34 549 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 CLECL1Q8IZS7 167 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 UBE2J2Q8N2K1 259 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 ELOA3Q8NG57 546 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 OR2W6PQ8NHA6 318 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 XAGE5Q8WWM1 108 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 APH1AQ96BI3 265 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 ZG16BQ96DA0 208 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 ZHX1-C8orf76Q96EF9 292 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 ARL5BQ96KC2 179 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 ADAD1Q96M93 576 aaKnown RBP9.33□□□□□ -0.92
RFFL-209ENST00000581265 ZIM3Q96PE6 472 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 C19orf24Q9BVV8 132 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 ROPN1BQ9BZX4 212 aaPredicted RBP9.33□□□□□ -0.92
RFFL-209ENST00000581265 OR51I1Q9H343 314 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 ROPN1Q9HAT0 212 aaPredicted RBP9.33□□□□□ -0.92
RFFL-209ENST00000581265 CTPS2Q9NRF8 586 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 CBLN4Q9NTU7 201 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 ASB6Q9NWX5 421 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 TAS2R16Q9NYV7 291 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 NOP53Q9NZM5 478 aaKnown RBP9.33□□□□□ -0.92
RFFL-209ENST00000581265 MALT1Q9UDY8 824 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 CHRNA9Q9UGM1 479 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 TRAPPC4Q9Y296 219 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 SLC35A3Q9Y2D2 325 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 HDGFL3Q9Y3E1 203 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 IGHV4-30-2A0A087WSY4 118 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 FAM234BA2RU67 622 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 CCT8L1PA6NM43 557 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 BCAS1O75363 584 aaPredicted RBP9.32□□□□□ -0.92
RFFL-209ENST00000581265 MRPL33O75394 65 aaKnown RBP9.32□□□□□ -0.92
RFFL-209ENST00000581265 RAD51DO75771 328 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 IGHV3-9P01782 118 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 DHRS4L1P0CG22 281 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 OR12D1P0DN82 309 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 UQCRC2P22695 453 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 RYKP34925 604 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 ETV4P43268 484 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 PHC1P78364 1004 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 KCNJ10P78508 379 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 LOXL1Q08397 574 aaPredicted RBP9.32□□□□□ -0.92
RFFL-209ENST00000581265 RAB35Q15286 201 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 GABRA6Q16445 453 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 KRTAP24-1Q3LI83 254 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 C1QTNF12Q5T7M4 302 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 ATAD3BQ5T9A4 648 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 SLC22A25Q6T423 547 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 VPS37AQ8NEZ2 397 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 OR52N5Q8NH56 324 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 ZNF563Q8TA94 476 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 PIGXQ8TBF5 258 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 RAB8BQ92930 207 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 ROPN1LQ96C74 230 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 SLC35G5Q96KT7 338 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 TNFRSF13CQ96RJ3 184 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 INPP5KQ9BT40 448 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 CACNG6Q9BXT2 260 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 AKTIPQ9H8T0 292 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 EXOSC3Q9NQT5 275 aaKnown RBP9.32□□□□□ -0.92
RFFL-209ENST00000581265 TMEM181Q9P2C4 612 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 WDR45Q9Y484 360 aa9.32□□□□□ -0.92
RFFL-209ENST00000581265 HEATR1Q9H583 2144 aaKnown RBP9.32□□□□□ -0.92
RFFL-209ENST00000581265 H7C417 338 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 PDLIM1O00151 329 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 SPRY1O43609 319 aaPredicted RBP9.31□□□□□ -0.92
RFFL-209ENST00000581265 TYROBPO43914 113 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 EIF1BO60739 113 aaKnown RBP9.31□□□□□ -0.92
RFFL-209ENST00000581265 FAM157CP0CG43 387 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 CREB1P16220 341 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 MAGEA8P43361 318 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 HTR3AP46098 478 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 ZNF83P51522 516 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 MAP2K6P52564 334 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 NUDT6P53370 316 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 CASP9P55211 416 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 VLDLRP98155 873 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 PLAURQ03405 335 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 CHRNEQ04844 493 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 CASP8Q14790 479 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 TMEM249Q2WGJ8 235 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 ANXA8L1Q5VT79 327 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms