RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 CISD2Q8N5K1 135 aaKnown RBP9.39□□□□□ -0.91
CCDC47-203ENST00000580986 ST6GALNAC3Q8NDV1 305 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 PIK3C3Q8NEB9 887 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 OR10Q1Q8NGQ4 319 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 OR6S1Q8NH40 331 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 STK35Q8TDR2 534 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 SARAFQ96BY9 339 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 ZNF524Q96C55 264 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 RSRC1Q96IZ7 334 aaKnown RBP9.39□□□□□ -0.91
CCDC47-203ENST00000580986 HS6ST2Q96MM7 605 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 SFXN2Q96NB2 322 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 PIP5K1AQ99755 562 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 PRDM14Q9GZV8 571 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 DENND2DQ9H6A0 471 aaPredicted RBP9.39□□□□□ -0.91
CCDC47-203ENST00000580986 ASF1BQ9NVP2 202 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 PAQR5Q9NXK6 330 aaPredicted RBP9.39□□□□□ -0.91
CCDC47-203ENST00000580986 SELENONQ9NZV5 590 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 RIMS3Q9UJD0 308 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 TMED7-TICAM2A0A0A6YYA0 188 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 NPIPA5E9PKD4 350 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 FFAR1O14842 300 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 LYPD3O95274 346 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 THY1P04216 161 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 FCGR1AP12314 374 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 ZNF708P17019 499 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 CXCR1P25024 350 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 CDH12P55289 794 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 HOXC5Q00444 222 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 KPNB1Q14974 876 aaKnown RBP9.38□□□□□ -0.91
CCDC47-203ENST00000580986 COLEC12Q5KU26 742 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 Q6ZPB1 254 aaPredicted RBP9.38□□□□□ -0.91
CCDC47-203ENST00000580986 YRDCQ86U90 279 aaKnown RBP9.38□□□□□ -0.91
CCDC47-203ENST00000580986 TSPYL5Q86VY4 417 aaPredicted RBP9.38□□□□□ -0.91
CCDC47-203ENST00000580986 CHERPQ8IWX8 916 aaKnown RBP9.38□□□□□ -0.91
CCDC47-203ENST00000580986 RNF113BQ8IZP6 322 aaKnown RBP9.38□□□□□ -0.91
CCDC47-203ENST00000580986 CADM2Q8N3J6 435 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 CPT1CQ8TCG5 803 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 ABTB1Q969K4 478 aaPredicted RBP9.38□□□□□ -0.91
CCDC47-203ENST00000580986 SLCO4A1Q96BD0 722 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 DDIT4LQ96D03 193 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 SLC41A3Q96GZ6 507 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 BBC3Q96PG8 261 aaPredicted RBP9.38□□□□□ -0.91
CCDC47-203ENST00000580986 SEPHS2Q99611 448 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 CHID1Q9BWS9 393 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 POTEKPQ9BYX7 375 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 SLC6A15Q9H2J7 730 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 LDAHQ9H6V9 325 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 NMNAT1Q9HAN9 279 aaPredicted RBP9.38□□□□□ -0.91
CCDC47-203ENST00000580986 CTPS2Q9NRF8 586 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 LUZP4Q9P127 313 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 NPIPA1Q9UND3 350 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 TMED7Q9Y3B3 224 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 HDGFL3Q9Y3E1 203 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 LIPGQ9Y5X9 500 aa9.38□□□□□ -0.91
CCDC47-203ENST00000580986 FREM3P0C091 2139 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 PRRC2CQ9Y520 2896 aaKnown RBP9.37□□□□□ -0.91
CCDC47-203ENST00000580986 ELOA3DA6NLF2 546 aaPredicted RBP9.37□□□□□ -0.91
CCDC47-203ENST00000580986 CPSF4LA6NMK7 179 aaKnown RBP9.37□□□□□ -0.91
CCDC47-203ENST00000580986 A8MVM7 634 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 B8ZZF3 427 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 HNRNPRO43390 633 aaKnown RBP9.37□□□□□ -0.91
CCDC47-203ENST00000580986 GMFGO60234 142 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 FKBP6O75344 327 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 DEAF1O75398 565 aaPredicted RBP9.37□□□□□ -0.91
CCDC47-203ENST00000580986 H1F0P07305 194 aaKnown RBP9.37□□□□□ -0.91
CCDC47-203ENST00000580986 HOXD4P09016 255 aaPredicted RBP9.37□□□□□ -0.91
CCDC47-203ENST00000580986 BMP7P18075 431 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 POU3F2P20265 443 aaPredicted RBP9.37□□□□□ -0.91
CCDC47-203ENST00000580986 PTGER4P35408 488 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 CLDN18P56856 261 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 RBPJQ06330 500 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 PIN1Q13526 163 aaPredicted RBP9.37□□□□□ -0.91
CCDC47-203ENST00000580986 TRAM2Q15035 370 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 SF3B4Q15427 424 aaKnown RBP eCLIP9.37□□□□□ -0.91
CCDC47-203ENST00000580986 ELOA3BQ3SY89 546 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 SYT14P1Q58G82 188 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 OR2T5Q6IEZ7 315 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 GDF7Q7Z4P5 450 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 GGNQ86UU5 652 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 LILRA2Q8N149 483 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 LINC00471Q8N535 108 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 ELOA3Q8NG57 546 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 OR2T29Q8NH02 315 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 ACOT11Q8WXI4 607 aaPredicted RBP9.37□□□□□ -0.91
CCDC47-203ENST00000580986 ADGRG7Q96K78 797 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 KLHL15Q96M94 604 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 UCN2Q96RP3 112 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 EPYCQ99645 322 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 TIMP4Q99727 224 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 NPAS1Q99742 590 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 PRSS27Q9BQR3 290 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 FUZQ9BT04 418 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 FNDC11Q9BVV2 318 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 DEFB127Q9H1M4 99 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 MAN2C1Q9NTJ4 1040 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 SPRR3Q9UBC9 169 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 SLC7A7Q9UM01 511 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 AURKCQ9UQB9 309 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 TRAPPC4Q9Y296 219 aa9.37□□□□□ -0.91
CCDC47-203ENST00000580986 RPH3AQ9Y2J0 694 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms