RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ZDHHC13Q8IUH4 622 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 PM20D2Q8IYS1 436 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 LINC00471Q8N535 108 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 LSMEM1Q8N8F7 131 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 PIK3C3Q8NEB9 887 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 OR6T1Q8NGN1 323 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 OR10Q1Q8NGQ4 319 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 SDCCAG3Q96C92 435 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 KLHDC3Q9BQ90 382 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 ZNF559Q9BR84 538 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 C9orf16Q9BUW7 83 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 TRIM2Q9C040 744 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 NTN4Q9HB63 628 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 HEATR5AQ86XA9 2040 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 A0A1W2PRQ8 180 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 ARRDC5A6NEK1 342 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 FIGNL2A6NMB9 653 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 J3QKU1 62 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 hCG_2039718K7EN88 272 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 GP1BBP13224 206 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 POU3F2P20265 443 aaPredicted RBP14.01□□□□□ -0.17
SS18-216ENST00000580751 FPR1P21462 350 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 VHLP40337 213 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 UQCRFS1P47985 274 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 PTDSS1P48651 473 aaKnown RBP14.01□□□□□ -0.17
SS18-216ENST00000580751 DLX5P56178 289 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 DGCR6Q14129 220 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 TOMM34Q15785 309 aaPredicted RBP14.01□□□□□ -0.17
SS18-216ENST00000580751 SWT1Q5T5J6 900 aaKnown RBP14.01□□□□□ -0.17
SS18-216ENST00000580751 ZNF613Q6PF04 617 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 SHQ1Q6PI26 577 aaKnown RBP14.01□□□□□ -0.17
SS18-216ENST00000580751 AMIGO2Q86SJ2 522 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 OFCC1Q8IZS5 231 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 OR5K1Q8NHB7 308 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 EME1Q96AY2 570 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 TIMP4Q99727 224 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 PRDM14Q9GZV8 571 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 ACER3Q9NUN7 267 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 OSGIN2Q9Y236 505 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 AP4B1Q9Y6B7 739 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 PCNX3Q9H6A9 2034 aa14.01□□□□□ -0.17
SS18-216ENST00000580751 FASNP49327 2511 aaKnown RBP14.01□□□□□ -0.17
SS18-216ENST00000580751 MED12Q93074 2177 aa14□□□□□ -0.17
SS18-216ENST00000580751 GTF3C1Q12789 2109 aa14□□□□□ -0.17
SS18-216ENST00000580751 HIVEP3Q5T1R4 2406 aa14□□□□□ -0.17
SS18-216ENST00000580751 SHISA8B8ZZ34 492 aa14□□□□□ -0.17
SS18-216ENST00000580751 H3BML4 177 aa14□□□□□ -0.17
SS18-216ENST00000580751 M0R3H8 397 aa14□□□□□ -0.17
SS18-216ENST00000580751 ADAM11O75078 769 aa14□□□□□ -0.17
SS18-216ENST00000580751 E2F6O75461 281 aa14□□□□□ -0.17
SS18-216ENST00000580751 NTN1O95631 604 aa14□□□□□ -0.17
SS18-216ENST00000580751 STSP08842 583 aa14□□□□□ -0.17
SS18-216ENST00000580751 GKN3PP0CG01 181 aa14□□□□□ -0.17
SS18-216ENST00000580751 PEPDP12955 493 aa14□□□□□ -0.17
SS18-216ENST00000580751 ACAA2P42765 397 aaKnown RBP14□□□□□ -0.17
SS18-216ENST00000580751 HTR3AP46098 478 aa14□□□□□ -0.17
SS18-216ENST00000580751 IDH2P48735 452 aaKnown RBP14□□□□□ -0.17
SS18-216ENST00000580751 ZNF136P52737 540 aa14□□□□□ -0.17
SS18-216ENST00000580751 SESN3P58005 492 aa14□□□□□ -0.17
SS18-216ENST00000580751 ST3GAL3Q11203 375 aa14□□□□□ -0.17
SS18-216ENST00000580751 BCL2A1Q16548 175 aa14□□□□□ -0.17
SS18-216ENST00000580751 GRINAQ7Z429 371 aa14□□□□□ -0.17
SS18-216ENST00000580751 CD163Q86VB7 1156 aa14□□□□□ -0.17
SS18-216ENST00000580751 COMTD1Q86VU5 262 aa14□□□□□ -0.17
SS18-216ENST00000580751 OR4D11Q8NGI4 311 aa14□□□□□ -0.17
SS18-216ENST00000580751 OR5M1Q8NGP8 315 aa14□□□□□ -0.17
SS18-216ENST00000580751 VANGL1Q8TAA9 524 aaPredicted RBP14□□□□□ -0.17
SS18-216ENST00000580751 POC1BQ8TC44 478 aa14□□□□□ -0.17
SS18-216ENST00000580751 MCHR1Q99705 422 aa14□□□□□ -0.17
SS18-216ENST00000580751 PSD2Q9BQI7 771 aa14□□□□□ -0.17
SS18-216ENST00000580751 FNDC11Q9BVV2 318 aa14□□□□□ -0.17
SS18-216ENST00000580751 KLHL4Q9C0H6 718 aa14□□□□□ -0.17
SS18-216ENST00000580751 TP63Q9H3D4 680 aaPredicted RBP14□□□□□ -0.17
SS18-216ENST00000580751 TMEM27Q9HBJ8 222 aa14□□□□□ -0.17
SS18-216ENST00000580751 TNFRSF10DQ9UBN6 386 aa14□□□□□ -0.17
SS18-216ENST00000580751 A4GNTQ9UNA3 340 aa14□□□□□ -0.17
SS18-216ENST00000580751 ZNF337Q9Y3M9 751 aa14□□□□□ -0.17
SS18-216ENST00000580751 SAMHD1Q9Y3Z3 626 aaKnown RBP14□□□□□ -0.17
SS18-216ENST00000580751 GCN1Q92616 2671 aaKnown RBP13.99□□□□□ -0.17
SS18-216ENST00000580751 LRRK2Q5S007 2527 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 TRGV8A0A0C4DH27 118 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 HTR3EA5X5Y0 456 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 GJE1A6NN92 205 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 G3V2T6 193 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 TNFRSF11BO00300 401 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 ZNHIT1O43257 154 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 FRS3O43559 492 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 WDR1O75083 606 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 GADD45GO95257 159 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 HPRP00739 348 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 MT-ND1P03886 318 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 H1F0P07305 194 aaKnown RBP13.99□□□□□ -0.17
SS18-216ENST00000580751 GABRA1P14867 456 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 CPN1P15169 458 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 ZNF708P17019 499 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 TNFRSF1BP20333 461 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 RRM2P31350 389 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 PTGER4P35408 488 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 SLC1A3P43003 542 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms