RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 TIMM23O14925 209 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 SCAMP2O15127 329 aaKnown RBP6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 MRPL33O75394 65 aaKnown RBP6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 NCR1O76036 304 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 KCNK2O95069 426 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 WNT11O96014 354 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 KNG1P01042 644 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 IGLV1-44P01699 117 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 CELA3BP08861 270 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 ACP2P11117 423 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 GFAPP14136 432 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 CHN1P15882 459 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 TCN1P20061 433 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 ASMTP46597 345 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 P2RX1P51575 399 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 NCBP2P52298 156 aaKnown RBP eCLIP6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 SLC16A1P53985 500 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 TMEM33P57088 247 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 POU3F1Q03052 451 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 IFT88Q13099 833 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 GGTA1PQ4G0N0 100 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 SLC9B1Q4ZJI4 515 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 KLF17Q5JT82 389 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 C1QTNF12Q5T7M4 302 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 DCAF12L2Q5VW00 463 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 GALNT18Q6P9A2 607 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 TMPPEQ6ZT21 453 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 IKBIPQ70UQ0 350 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 RPS27LQ71UM5 84 aaKnown RBP6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 MTDHQ86UE4 582 aaKnown RBP6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 CCDC103Q8IW40 242 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 CENPLQ8N0S6 344 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 PDIK1LQ8N165 341 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 RNF214Q8ND24 703 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 FBXO36Q8NEA4 188 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 OR4F15Q8NGB8 312 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 OR4F6Q8NGB9 312 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 CEP70Q8NHQ1 597 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 C16orf78Q8WTQ4 265 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 RDH5Q92781 318 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 UBE2FQ969M7 185 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 SLC25A28Q96A46 364 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 LRRC39Q96DD0 335 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 GIMAP5Q96F15 307 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 BBS4Q96RK4 519 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 BAG1Q99933 345 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 KCNS3Q9BQ31 491 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 QRSL1Q9H0R6 528 aaKnown RBP6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 C3orf14Q9HBI5 128 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 HHATLQ9HCP6 504 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 UBQLN4Q9NRR5 601 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 GIMAP4Q9NUV9 329 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 DDX18Q9NVP1 670 aaKnown RBP6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 NSMCE4AQ9NXX6 385 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 MID2Q9UJV3 735 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 CARD8Q9Y2G2 431 aa6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 SOX21Q9Y651 276 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1-217ENST00000580654 CCDC151A5D8V7 595 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 SLC22A31A6NKX4 558 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 SYCE1LA8MT33 242 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 NR5A2O00482 541 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 SCDO00767 359 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 TP73O15350 636 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 PPIHO43447 177 aaKnown RBP6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 PCDH7O60245 1069 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 SLITRK5O94991 958 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 NUDT14O95848 222 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 ANPEPP15144 967 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 CDH2P19022 906 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 MPGP29372 298 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 TYK2P29597 1187 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 PCGF2P35227 344 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 ARL1P40616 181 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 CCNG1P51959 295 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 SEC24CP53992 1094 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 SUMO3P55854 103 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 TUBA1BP68363 451 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 TUBA4AP68366 448 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 QPRTQ15274 297 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 TBRG1Q3YBR2 411 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 ZNF311Q5JNZ3 666 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 CCNJQ5T5M9 372 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 AVPI1Q5T686 147 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 SAXO2Q658L1 398 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 C11orf87Q6NUJ2 197 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 LETMD1Q6P1Q0 360 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 C3orf33Q6P1S2 294 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 KLHL24Q6TFL4 600 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 CASP12Q6UXS9 341 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 C17orf107Q6ZR85 190 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 TUBA1AQ71U36 451 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 SPATC1Q76KD6 591 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 RHEBL1Q8TAI7 183 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 FBXO30Q8TB52 745 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 PHOSPHO1Q8TCT1 267 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 SELENOMQ8WWX9 145 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 JADE3Q92613 823 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 ATP6V1E2Q96A05 226 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 DNAJA3Q96EY1 480 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms