RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, human

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMP22-208	ENST00000580584	TACR3	P29371	465 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	CSNK2A1	P68400	391 aa	Predicted RBP	13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	EPS8	Q12929	822 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	RGN	Q15493	299 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	DEFB113	Q30KQ7	82 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	ABLIM2	Q6H8Q1	611 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	ALKBH2	Q6NS38	261 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	BLOC1S3	Q6QNY0	202 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	WFDC8	Q8IUA0	241 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	MSRB3	Q8IXL7	192 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	CKAP2	Q8WWK9	683 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	MAL2	Q969L2	176 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	S100PBP	Q96BU1	408 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	MBD6	Q96DN6	1003 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	SPDL1	Q96EA4	605 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	ALPK1	Q96QP1	1244 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	UBTD1	Q9HAC8	227 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	CALML5	Q9NZT1	146 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	SLAMF8	Q9P0V8	285 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	PRSS50	Q9UI38	385 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	OSGIN1	Q9UJX0	560 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	TMED7	Q9Y3B3	224 aa		13.78	□□□□□ -0.2
PMP22-208	ENST00000580584	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	TMEM72	A0PK05	275 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	ZNF814	B7Z6K7	855 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	PMS2P2	O95744	297 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	ADA	P00813	363 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	PPP3CB	P16298	524 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	CD53	P19397	219 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	PSMB1	P20618	241 aa	Known RBP	13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	SLC1A3	P43003	542 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	POLR2H	P52434	150 aa	Known RBP	13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	AGK	Q53H12	422 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	PAGE3	Q5JUK9	113 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	C10orf111	Q8N326	155 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	CLIP4	Q8N3C7	705 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	PMM1	Q92871	262 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	MAGEB18	Q96M61	343 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	TACO1	Q9BSH4	297 aa	Known RBP	13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	A4GALT	Q9NPC4	353 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	FANCF	Q9NPI8	374 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	SLC52A3	Q9NQ40	469 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	GPR52	Q9Y2T5	361 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	HDGFL3	Q9Y3E1	203 aa		13.77	□□□□□ -0.21
PMP22-208	ENST00000580584	ZC3H12D	A2A288	527 aa	Known RBP	13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	TMEM247	A6NEH6	219 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	FAAH	O00519	579 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	KLF4	O43474	513 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	RAMP1	O60894	148 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	PRG2	P13727	222 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	HTR3A	P46098	478 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	OR3A2	P47893	321 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	ATP4B	P51164	291 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	OR2B6	P58173	313 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	SQLE	Q14534	574 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	LRIF1	Q5T3J3	769 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	RNF220	Q5VTB9	566 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	MTDH	Q86UE4	582 aa	Known RBP	13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	ZNF440	Q8IYI8	595 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	CADM2	Q8N3J6	435 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	ZHX1-C8orf76	Q96EF9	292 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	NPHS2	Q9NP85	383 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	THUMPD1	Q9NXG2	353 aa	Known RBP	13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	VAPA	Q9P0L0	249 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	DCTN4	Q9UJW0	460 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	CHST2	Q9Y4C5	530 aa		13.76	□□□□□ -0.21
PMP22-208	ENST00000580584	ITPR3	Q14573	2671 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584		A0A0G2JPF8	293 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	ZNF716	A6NP11	495 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	ZNF724	A8MTY0	619 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	HNRNPCL2	B2RXH8	293 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	HNRNPCL3	B7ZW38	293 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	FRS3	O43559	492 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	HNRNPCL1	O60812	293 aa	Known RBP	13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	THBS1	P07996	1170 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	HNRNPCL4	P0DMR1	293 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	IMPDH2	P12268	514 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	BMP2	P12643	396 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	UQCRB	P14927	111 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	IL32	P24001	234 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	ACAA2	P42765	397 aa	Known RBP	13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	FADD	Q13158	208 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	LARS2	Q15031	903 aa	Known RBP	13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	BEX5	Q5H9J7	111 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	SFRP5	Q5T4F7	317 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	SERPINA11	Q86U17	422 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	CCDC103	Q8IW40	242 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	STEAP2	Q8NFT2	490 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	NFKBID	Q8NI38	313 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	KISS1R	Q969F8	398 aa	Predicted RBP	13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	DDIT4L	Q96D03	193 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	OR10A4	Q9H209	315 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	RAD21L1	Q9H4I0	556 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	IKZF5	Q9H5V7	419 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	CACYBP	Q9HB71	228 aa	Known RBP	13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	TMEM181	Q9P2C4	612 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	AKAP6	Q13023	2319 aa		13.75	□□□□□ -0.21
PMP22-208	ENST00000580584	IGKV3D-15	A0A087WSY6	115 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	TRBV5-3	A0A0A0MS03	114 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms