RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ADGRG3Q86Y34 549 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 MEIOBQ8N635 442 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 OR2T29Q8NH02 315 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 CPT1CQ8TCG5 803 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 BARD1Q99728 777 aaKnown RBP12.91□□□□□ -0.34
SKA2-205ENST00000580541 TMEM43Q9BTV4 400 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 PRR14Q9BWN1 585 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 POTEKPQ9BYX7 375 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 SLC19A3Q9BZV2 496 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 DNAJB9Q9UBS3 223 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 HDGFL3Q9Y3E1 203 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 ZNF337Q9Y3M9 751 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 SVILO95425 2214 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 ZNF407Q9C0G0 2248 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 ATMQ13315 3056 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 H3BML4 177 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 ENTPD5O75356 428 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 LDLRP01130 860 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 CELA3AP09093 270 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 TFPIP10646 304 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 BMP7P18075 431 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 RRM2P31350 389 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 ERFP50548 548 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 HMGA2P52926 109 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 B3GALT5-AS1P59052 145 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 MFSD13AQ14CX5 517 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 DCST1Q5T197 706 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 WLSQ5T9L3 541 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 VASNQ6EMK4 673 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 ESPNLQ6ZVH7 1005 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 POC1BQ8TC44 478 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 SLX1AQ9BQ83 275 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 TSPAN10Q9H1Z9 355 aaPredicted RBP12.9□□□□□ -0.34
SKA2-205ENST00000580541 SLC6A15Q9H2J7 730 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 ASF1BQ9NVP2 202 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 SLC6A5Q9Y345 797 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 MED31Q9Y3C7 131 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 HRH3Q9Y5N1 445 aa12.9□□□□□ -0.34
SKA2-205ENST00000580541 GTF3C1Q12789 2109 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 COL6A6A6NMZ7 2263 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 J3KTA2 159 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 TNFRSF11BO00300 401 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 CLOCKO15516 846 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 E2F6O75461 281 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 HOXD4P09016 255 aaPredicted RBP12.89□□□□□ -0.35
SKA2-205ENST00000580541 CPN1P15169 458 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 CCNA2P20248 432 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 MST1P26927 711 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 PTGS2P35354 604 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 CSNK2A1P68400 391 aaPredicted RBP12.89□□□□□ -0.35
SKA2-205ENST00000580541 TMEM176BQ3YBM2 270 aaPredicted RBP12.89□□□□□ -0.35
SKA2-205ENST00000580541 IQCCQ4KMZ1 466 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 SYT14P1Q58G82 188 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 FGD3Q5JSP0 725 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 GFRALQ6UXV0 394 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 LINC00114Q6XXX2 140 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 ZNF730Q6ZMV8 503 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 ATP6V1C2Q8NEY4 427 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 OR5M1Q8NGP8 315 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 TMEM239Q8WW34 195 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 PYDC1Q8WXC3 89 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 ACOT11Q8WXI4 607 aaPredicted RBP12.89□□□□□ -0.35
SKA2-205ENST00000580541 SLCO4A1Q96BD0 722 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 DHRS1Q96LJ7 313 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 TIMP4Q99727 224 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 TAPBPLQ9BX59 468 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 S100A14Q9HCY8 104 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 RHCGQ9UBD6 479 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 TRAPPC4Q9Y296 219 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 NTNG1Q9Y2I2 539 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 SAMHD1Q9Y3Z3 626 aaKnown RBP12.89□□□□□ -0.35
SKA2-205ENST00000580541 TESMINQ9Y4I5 508 aa12.89□□□□□ -0.35
SKA2-205ENST00000580541 NCKAP5O14513 1909 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 A0A1B0GTH9 108 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 AHRRA9YTQ3 701 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 FFAR1O14842 300 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 DIRAS1O95057 198 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 PRSS23O95084 383 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 AHSA1O95433 338 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 IGF2P01344 180 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 GABRA1P14867 456 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 DNAJA1P31689 397 aaKnown RBP12.88□□□□□ -0.35
SKA2-205ENST00000580541 PTGER4P35408 488 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 CASP6P55212 293 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 CARD18P57730 90 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 TAF11Q15544 211 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 SGCBQ16585 318 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 ZNF605Q86T29 641 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 OR6S1Q8NH40 331 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 SMPDL3BQ92485 455 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 ZHX1-C8orf76Q96EF9 292 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 NRBF2Q96F24 287 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 CENPNQ96H22 339 aaPredicted RBP12.88□□□□□ -0.35
SKA2-205ENST00000580541 KLHL15Q96M94 604 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 ALPK1Q96QP1 1244 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 KLHDC3Q9BQ90 382 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 TMEM5Q9Y2B1 443 aa12.88□□□□□ -0.35
SKA2-205ENST00000580541 TRAV36DV7A0A075B6V5 113 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 TMEM72A0PK05 275 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 SHISA8B8ZZ34 492 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms