RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 RNF217Q8TC41 542 aa14.35□□□□□ -0.11
CSNK1D-212ENST00000580061 MPP4Q96JB8 637 aa14.35□□□□□ -0.11
CSNK1D-212ENST00000580061 SLX1AQ9BQ83 275 aa14.35□□□□□ -0.11
CSNK1D-212ENST00000580061 ZNF426Q9BUY5 554 aa14.35□□□□□ -0.11
CSNK1D-212ENST00000580061 ANKRD19PQ9H560 264 aa14.35□□□□□ -0.11
CSNK1D-212ENST00000580061 EXO5Q9H790 373 aa14.35□□□□□ -0.11
CSNK1D-212ENST00000580061 S100A14Q9HCY8 104 aa14.35□□□□□ -0.11
CSNK1D-212ENST00000580061 SERINC1Q9NRX5 453 aa14.35□□□□□ -0.11
CSNK1D-212ENST00000580061 SPRR3Q9UBC9 169 aa14.35□□□□□ -0.11
CSNK1D-212ENST00000580061 A0A1W2PRQ8 180 aa14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 TMEM72A0PK05 275 aa14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 AQP7O14520 342 aa14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 ADAMDEC1O15204 470 aa14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 ZNF208O43345 1280 aa14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 GADD45GO95257 159 aa14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 BMP7P18075 431 aa14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 CCNA2P20248 432 aa14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 GCKP35557 465 aa14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 RAC1P63000 192 aa14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 DGCR6Q14129 220 aa14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 VASNQ6EMK4 673 aa14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 LILRA2Q8N149 483 aa14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 STMN2Q93045 179 aa14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 ABTB1Q969K4 478 aaPredicted RBP14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 SPIN1Q9Y657 262 aaPredicted RBP14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 AP4B1Q9Y6B7 739 aa14.34□□□□□ -0.11
CSNK1D-212ENST00000580061 GTF3C1Q12789 2109 aa14.33□□□□□ -0.11
CSNK1D-212ENST00000580061 SHANK1Q9Y566 2161 aa14.33□□□□□ -0.11
CSNK1D-212ENST00000580061 KIAA1549Q9HCM3 1950 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 SVILO95425 2214 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 IGKV1D-42A0A075B6H8 117 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 A0A1B0GTH9 108 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 KRT36O76013 467 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 FCGR1AP12314 374 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 PEPDP12955 493 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 POU3F2P20265 443 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 FASP25445 335 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 FKBP2P26885 142 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 SHC1P29353 583 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 RBM34P42696 430 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 STARP49675 285 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 LHX2P50458 406 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 HMGA2P52926 109 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 MLLT10P55197 1068 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 SMIM11AP58511 58 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 HSF1Q00613 529 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 EGR4Q05215 589 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 CRYZQ08257 329 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 FOXD4Q12950 439 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 DCST1Q5T197 706 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 ARHGAP11AQ6P4F7 1023 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 GHDCQ8N2G8 530 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 ATP6V1C2Q8NEY4 427 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 SLC7A13Q8TCU3 470 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 SLC25A43Q8WUT9 341 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 TMEM255BQ8WV15 326 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 FUZQ9BT04 418 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 TMEM43Q9BTV4 400 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 TMEM185BQ9H7F4 350 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 REEP1Q9H902 201 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 VNN3Q9NY84 501 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 DNAJB9Q9UBS3 223 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 LYVE1Q9Y5Y7 322 aa14.33□□□□□ -0.12
CSNK1D-212ENST00000580061 SPTA1P02549 2419 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 TRBV4-1A0A0J9YWV2 114 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 ZC3H12DA2A288 527 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 A8MVM7 634 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 TNFRSF11BO00300 401 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 CLOCKO15516 846 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 NPIPB7O75200 414 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 DEAF1O75398 565 aaPredicted RBP14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 ZNF708P17019 499 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 SFTPDP35247 375 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 LIMS1P48059 325 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 CLK1P49759 484 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 CLDN20P56880 219 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 ATP6AP1Q15904 470 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 BCL2A1Q16548 175 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 SYT14P1Q58G82 188 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 FGD3Q5JSP0 725 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 TTC33Q6PID6 262 aaPredicted RBP14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 FGD2Q7Z6J4 655 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 GGNQ86UU5 652 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 CHERPQ8IWX8 916 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 OR52J3Q8NH60 311 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 CPT1CQ8TCG5 803 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 STK35Q8TDR2 534 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 TMEM239Q8WW34 195 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 ACOT11Q8WXI4 607 aaPredicted RBP14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 LRTOMTQ8WZ04 291 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 SMPDL3BQ92485 455 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 DDIT4LQ96D03 193 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 HS6ST2Q96MM7 605 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 TIMP4Q99727 224 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 OR11A1Q9GZK7 315 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 STOML1Q9UBI4 398 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 TNFRSF10DQ9UBN6 386 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 COL6A6A6NMZ7 2263 aa14.32□□□□□ -0.12
CSNK1D-212ENST00000580061 SMG1Q96Q15 3661 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms