RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 B3GNT2Q9NY97 397 aa1.33□□□□□ -2.2
TOP2A-202ENST00000577541 IL36GQ9NZH8 169 aa1.33□□□□□ -2.2
TOP2A-202ENST00000577541 GNG12Q9UBI6 72 aa1.33□□□□□ -2.2
TOP2A-202ENST00000577541 PSG11Q9UQ72 335 aa1.33□□□□□ -2.2
TOP2A-202ENST00000577541 ERVW-1Q9UQF0 538 aa1.33□□□□□ -2.2
TOP2A-202ENST00000577541 CHMP2BQ9UQN3 213 aa1.33□□□□□ -2.2
TOP2A-202ENST00000577541 RNF6Q9Y252 685 aa1.33□□□□□ -2.2
TOP2A-202ENST00000577541 NEUROG3Q9Y4Z2 214 aa1.33□□□□□ -2.2
TOP2A-202ENST00000577541 CACNG2Q9Y698 323 aa1.33□□□□□ -2.2
TOP2A-202ENST00000577541 KIR2DL5BA0A0G2JN68 375 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 KIR2DL5BA0A0G2JPC4 375 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 NKX2-6A6NCS4 301 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 TUBAL3A6NHL2 446 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 FAM166BA8MTA8 275 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 ANKRD63C9JTQ0 380 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 G3V4G9 280 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 K7EQM0 130 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 KIF2AO00139 706 aaPredicted RBP1.32□□□□□ -2.2
TOP2A-202ENST00000577541 NDC80O14777 642 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 MAPK13O15264 365 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 NBR2O15453 112 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 BCAS1O75363 584 aaPredicted RBP1.32□□□□□ -2.2
TOP2A-202ENST00000577541 ANP32DO95626 131 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 CSF2P04141 144 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 KRT8P05787 483 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 HBQ1P09105 142 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 RCC1P18754 421 aaPredicted RBP1.32□□□□□ -2.2
TOP2A-202ENST00000577541 CYP2B6P20813 491 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 TBXA2RP21731 343 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 LAP3P28838 519 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 NMT1P30419 496 aaKnown RBP1.32□□□□□ -2.2
TOP2A-202ENST00000577541 UGT1A5P35504 534 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 RBMXP38159 391 aaKnown RBP1.32□□□□□ -2.2
TOP2A-202ENST00000577541 CASP4P49662 377 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 CHIT1Q13231 466 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 SLC36A3Q495N2 470 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 ZSCAN25Q6NSZ9 544 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 FAM71F2Q6NXP2 309 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 BLOC1S2Q6QNY1 142 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 WDR74Q6RFH5 385 aaPredicted RBP1.32□□□□□ -2.2
TOP2A-202ENST00000577541 VSTM4Q8IW00 320 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 KIR2DL5AQ8N109 375 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 CNPY4Q8N129 248 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 OR2L13Q8N349 312 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 MDS2Q8NDY4 140 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 OR1F12Q8NHA8 337 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 RAET1EQ8TD07 263 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 SPRYD4Q8WW59 207 aaPredicted RBP1.32□□□□□ -2.2
TOP2A-202ENST00000577541 TRUB1Q8WWH5 349 aaKnown RBP1.32□□□□□ -2.2
TOP2A-202ENST00000577541 DEDD2Q8WXF8 326 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 DCUN1D4Q92564 292 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 THRSPQ92748 146 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 TRIM44Q96DX7 344 aaPredicted RBP1.32□□□□□ -2.2
TOP2A-202ENST00000577541 ZNF607Q96SK3 696 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 MCHR1Q99705 422 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 ARHGDIGQ99819 225 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 CITED1Q99966 193 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 CRACR2AQ9BSW2 395 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 ALG12Q9BV10 488 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 RHBGQ9H310 441 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 AZI2Q9H6S1 392 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 VCPKMTQ9H867 229 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 NANSQ9NR45 359 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 AATFQ9NY61 560 aaKnown RBP eCLIP1.32□□□□□ -2.2
TOP2A-202ENST00000577541 MRPL39Q9NYK5 338 aaKnown RBP1.32□□□□□ -2.2
TOP2A-202ENST00000577541 CYTH4Q9UIA0 394 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 MRPS33Q9Y291 106 aaKnown RBP1.32□□□□□ -2.2
TOP2A-202ENST00000577541 POLDIP2Q9Y2S7 368 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 FRMPD4Q14CM0 1322 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 CARMIL1Q5VZK9 1371 aa1.32□□□□□ -2.2
TOP2A-202ENST00000577541 IGLV4-60A0A075B6I1 120 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 PPIAL4CA0A0B4J2A2 164 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 SMIM28A0A1B0GU29 152 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 A0A1W2PQ67 120 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 LRP5LA4QPB2 252 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 OR6C65A6NJZ3 312 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 PP2D1A8MPX8 630 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 H0YCG3 227 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 GFYI3L273 518 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 K7N7A8 449 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 ARPC3O15145 178 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 HCRTR1O43613 425 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 TBX19O60806 448 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 SURF6O75683 361 aaKnown RBP1.31□□□□□ -2.2
TOP2A-202ENST00000577541 IL1BP01584 269 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 OPN1MWP04001 364 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 UGT2B4P06133 528 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 CAPN1P07384 714 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 OR8U8P0C7N1 319 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 PPIAL4GP0DN37 164 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 OPN1MW2P0DN77 364 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 OPN1MW3P0DN78 364 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 PDHBP11177 359 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 H2AFXP16104 143 aaPredicted RBP1.31□□□□□ -2.2
TOP2A-202ENST00000577541 NPR2P20594 1047 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 VDAC1P21796 283 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 AQP1P29972 269 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 NTSP30990 170 aa1.31□□□□□ -2.2
TOP2A-202ENST00000577541 RPS10P46783 165 aaKnown RBP1.31□□□□□ -2.2
TOP2A-202ENST00000577541 SUCLG1P53597 346 aaKnown RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms