RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 WDR31Q8NA23 367 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 CLHC1Q8NHS4 586 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 SGMS2Q8NHU3 365 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 OR5P2Q8WZ92 322 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 BHLHE41Q9C0J9 482 aaPredicted RBP11.68□□□□□ -0.54
COPS3-214ENST00000577246 RAB1BQ9H0U4 201 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 MOV10Q9HCE1 1003 aaKnown RBP11.68□□□□□ -0.54
COPS3-214ENST00000577246 OBP2BQ9NPH6 170 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 ACER3Q9NUN7 267 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 CHRNA9Q9UGM1 479 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 MOKQ9UQ07 419 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 PCDHB14Q9Y5E9 798 aa11.68□□□□□ -0.54
COPS3-214ENST00000577246 ESPNB1AK53 854 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 PDLIM1O00151 329 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 EIF1BO60739 113 aaKnown RBP11.67□□□□□ -0.54
COPS3-214ENST00000577246 CSTAP01040 98 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 ABHD2P08910 425 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 MAPK1P28482 360 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 MPGP29372 298 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 PPOXP50336 477 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 DNAJB13P59910 316 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 ABHD12BQ7Z5M8 362 aaPredicted RBP11.67□□□□□ -0.54
COPS3-214ENST00000577246 OR52E4Q8NGH9 312 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 ZNF563Q8TA94 476 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 PSMA8Q8TAA3 256 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 SFXN5Q8TD22 340 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 OIT3Q8WWZ8 545 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 IFT81Q8WYA0 676 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 KATNB1Q9BVA0 655 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 CA10Q9NS85 328 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 BAIAP2L1Q9UHR4 511 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 ATP6V1HQ9UI12 483 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 METRNQ9UJH8 293 aa11.67□□□□□ -0.54
COPS3-214ENST00000577246 VSTM5A8MXK1 200 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 G3V2L1 256 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 SCAMP2O15127 329 aaKnown RBP11.66□□□□□ -0.54
COPS3-214ENST00000577246 GLRA3O75311 464 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 STX11O75558 287 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 CRYAAP02489 173 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 UBTFL6P0CB48 400 aaPredicted RBP11.66□□□□□ -0.54
COPS3-214ENST00000577246 EFNA1P20827 205 aaPredicted RBP11.66□□□□□ -0.54
COPS3-214ENST00000577246 GIFP27352 417 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 APEX1P27695 318 aaKnown RBP11.66□□□□□ -0.54
COPS3-214ENST00000577246 IDH3GP51553 393 aaPredicted RBP11.66□□□□□ -0.54
COPS3-214ENST00000577246 EFNB3Q15768 340 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 ZNF141Q15928 474 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 CCDC153Q494R4 210 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 RFTN2Q52LD8 501 aaPredicted RBP11.66□□□□□ -0.54
COPS3-214ENST00000577246 C9orf135Q5VTT2 229 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 CLEC6AQ6EIG7 209 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 GRINAQ7Z429 371 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 SPATA19Q7Z5L4 167 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.66□□□□□ -0.54
COPS3-214ENST00000577246 ANKS4BQ8N8V4 417 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 ZNF524Q96C55 264 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 C1orf159Q96HA4 380 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 SDF2Q99470 211 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 PRPF18Q99633 342 aaKnown RBP11.66□□□□□ -0.54
COPS3-214ENST00000577246 NAA11Q9BSU3 229 aaPredicted RBP11.66□□□□□ -0.54
COPS3-214ENST00000577246 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 GPATCH2Q9NW75 528 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 TRAPPC4Q9Y296 219 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 SLC35A3Q9Y2D2 325 aa11.66□□□□□ -0.54
COPS3-214ENST00000577246 FREM1Q5H8C1 2179 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 AZIN1O14977 448 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 LSM1O15116 133 aaKnown RBP11.65□□□□□ -0.54
COPS3-214ENST00000577246 URI1O94763 535 aaPredicted RBP11.65□□□□□ -0.54
COPS3-214ENST00000577246 STAMBPO95630 424 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 TACSTD2P09758 323 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 BCKDHAP12694 445 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 SLC1A3P43003 542 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 HTR3AP46098 478 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 OR2B6P58173 313 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 ACTG1P63261 375 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 SLC35A1P78382 337 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 GPR68Q15743 365 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 ZSWIM7Q19AV6 140 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 GALNTL6Q49A17 601 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 POMGNT2Q8NAT1 580 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 NEU4Q8WWR8 484 aaPredicted RBP11.65□□□□□ -0.54
COPS3-214ENST00000577246 BOD1Q96IK1 185 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 SLC38A2Q96QD8 506 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 OR7D2Q96RA2 312 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 CCDC106Q9BWC9 280 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 SAP130Q9H0E3 1048 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 CTPS2Q9NRF8 586 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 SLC7A10Q9NS82 523 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 TMEM181Q9P2C4 612 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 PSMC3IPQ9P2W1 217 aaPredicted RBP11.65□□□□□ -0.54
COPS3-214ENST00000577246 PTGDR2Q9Y5Y4 395 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 KCNE3Q9Y6H6 103 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 ALPK2Q86TB3 2170 aa11.65□□□□□ -0.54
COPS3-214ENST00000577246 LRP5LA4QPB2 252 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 CFLARO15519 480 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 LYPLA1O75608 230 aaPredicted RBP11.64□□□□□ -0.55
COPS3-214ENST00000577246 OR4A8P0C604 315 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 LINC00032P0C843 101 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 DAOP14920 347 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 GCAP28676 217 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 NTF4P34130 210 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms