RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ZNF726A6NNF4 738 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 SSX5O60225 188 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 CDC123O75794 336 aaPredicted RBP12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 NPPBP16860 134 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 ANXA7P20073 488 aaKnown RBP12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 MEF2DQ14814 521 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 DPPA4Q7L190 304 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 NLRC3Q7RTR2 1065 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 FAM122BQ7Z309 247 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 DGLUCYQ7Z3D6 616 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 NLGN4YQ8NFZ3 816 aaPredicted RBP12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 CHST8Q9H2A9 424 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 GLIPR2Q9H4G4 154 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 CDCP1Q9H5V8 836 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 MAN2C1Q9NTJ4 1040 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 CHST2Q9Y4C5 530 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 TVP23AA6NH52 213 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 AGAP14A8MT82 685 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 D6RAR5 112 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 GPR171O14626 319 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 KIAA0355O15063 1070 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 LATO43561 262 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 ADRB1P08588 477 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 SYN1P17600 705 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 SOX18P35713 384 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 FOXK2Q01167 660 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 GNMTQ14749 295 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 GXYLT1Q4G148 440 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 LILRA3Q8N6C8 439 aaPredicted RBP12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 EID2Q8N6I1 236 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 OR6M1Q8NGM8 313 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 MICU1Q9BPX6 476 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 OR8D2Q9GZM6 311 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 PRODH2Q9UF12 536 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 ADAM29Q9UKF5 820 aa12.23□□□□□ -0.45
PCDHGB3-201ENST00000576222 GFYI3L273 518 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 DPM1O60762 260 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 EIF4EP06730 217 aaKnown RBP12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 TEAD1P28347 426 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 GLP1RP43220 463 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 LUMP51884 338 aaPredicted RBP12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 TLE2Q04725 743 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 TMEM255BQ8WV15 326 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 MARC2Q969Z3 335 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 ATF6BQ99941 703 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 KATNBL1Q9H079 304 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 CIB4A0PJX0 185 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 P2RX6O15547 441 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 SULT1B1O43704 296 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 PRICKLE3O43900 615 aaPredicted RBP12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 LGI1O95970 557 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 SNRNP70P08621 437 aaKnown RBP12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 FOSL2P15408 326 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 BMPR1AP36894 532 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 YBX1P67809 324 aaKnown RBP12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 C2orf27AQ580R0 203 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 ALG10Q5BKT4 473 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 SPIN3Q5JUX0 258 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 DCST2Q5T1A1 773 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 ZNF440Q8IYI8 595 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 DTD2Q96FN9 168 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 UNKLQ9H9P5 680 aaKnown RBP12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 KCNJ16Q9NPI9 418 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 PRTFDC1Q9NRG1 225 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 TAAR2Q9P1P5 351 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 GJA5P36382 358 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 TAS2R31P59538 309 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 GAREM2Q75VX8 874 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 DPF3Q92784 378 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 SLC38A3Q99624 504 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 SGIP1Q9BQI5 828 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 HCAR1Q9BXC0 346 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 NKX6-2Q9C056 277 aaPredicted RBP12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 ANKRD19PQ9H560 264 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 HINT3Q9NQE9 182 aaKnown RBP12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 ZFC3H1O60293 1989 aaKnown RBP12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 TUBAL3A6NHL2 446 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 GABARAPH6UMI1 98 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 TPPPO94811 219 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 SOX9P48436 509 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 SHC2P98077 582 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 GDF7Q7Z4P5 450 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 OR5H2Q8NGV7 314 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 OR52I2Q8NH67 350 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 CDC6Q99741 560 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 MS4A8Q9BY19 250 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 FGF20Q9NP95 211 aaPredicted RBP12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 OR1A2Q9Y585 309 aa12.22□□□□□ -0.45
PCDHGB3-201ENST00000576222 MARF1Q9Y4F3 1742 aaKnown RBP12.21□□□□□ -0.45
PCDHGB3-201ENST00000576222 INHAP05111 366 aa12.21□□□□□ -0.45
PCDHGB3-201ENST00000576222 OR8U9P0C7N5 309 aa12.21□□□□□ -0.45
PCDHGB3-201ENST00000576222 IFNGR1P15260 489 aa12.21□□□□□ -0.45
PCDHGB3-201ENST00000576222 HERV-K104P61576 105 aa12.21□□□□□ -0.45
PCDHGB3-201ENST00000576222 RAB33AQ14088 237 aa12.21□□□□□ -0.45
PCDHGB3-201ENST00000576222 MRPL2Q5T653 305 aaKnown RBP12.21□□□□□ -0.45
PCDHGB3-201ENST00000576222 LDLRAD1Q5T700 205 aa12.21□□□□□ -0.45
PCDHGB3-201ENST00000576222 GRASPQ7Z6J2 395 aaPredicted RBP12.21□□□□□ -0.45
PCDHGB3-201ENST00000576222 CPXM2Q8N436 756 aa12.21□□□□□ -0.45
PCDHGB3-201ENST00000576222 ARL5BQ96KC2 179 aa12.21□□□□□ -0.45
PCDHGB3-201ENST00000576222 SAMD11Q96NU1 681 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms