RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 SLC25A53Q5H9E4 307 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 C3orf33Q6P1S2 294 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 C8orf82Q6P1X6 216 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-216ENST00000575599 ZNF836Q6ZNA1 936 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 DMRTC2Q8IXT2 367 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-216ENST00000575599 CMIPQ8IY22 773 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 SLC15A3Q8IY34 581 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 C10orf111Q8N326 155 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 RNF148Q8N7C7 305 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 ACBD4Q8NC06 268 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 RNASE6Q93091 150 aaKnown RBP11.89□□□□□ -0.51
RPAIN-216ENST00000575599 CPPED1Q9BRF8 314 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-216ENST00000575599 IKZF5Q9H5V7 419 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 PIF1Q9H611 641 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 RNF122Q9H9V4 155 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 A4GALTQ9NPC4 353 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 EXOSC3Q9NQT5 275 aaKnown RBP11.89□□□□□ -0.51
RPAIN-216ENST00000575599 RLIMQ9NVW2 624 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 CMTM6Q9NX76 183 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 PAQR5Q9NXK6 330 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-216ENST00000575599 PACSIN3Q9UKS6 424 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 ZNF443Q9Y2A4 671 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-216ENST00000575599 A0A0G2JPF8 293 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 HNRNPCL2B2RXH8 293 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 HNRNPCL3B7ZW38 293 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 H0YHG0 523 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 AP3D1O14617 1153 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 ADAM11O75078 769 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 PLGP00747 810 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-216ENST00000575599 HNRNPCL4P0DMR1 293 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 BMP2P12643 396 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 IDH2P48735 452 aaKnown RBP11.88□□□□□ -0.51
RPAIN-216ENST00000575599 CARD18P57730 90 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 MYBPHQ13203 477 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 LARS2Q15031 903 aaKnown RBP11.88□□□□□ -0.51
RPAIN-216ENST00000575599 VWA1Q6PCB0 445 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 PLEKHM3Q6ZWE6 761 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 OR10A6Q8NH74 314 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 NFKBIDQ8NI38 313 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 BBS10Q8TAM1 723 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 PMM1Q92871 262 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 OSTF1Q92882 214 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 CLPTM1LQ96KA5 538 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 SRXN1Q9BYN0 137 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 PIGMQ9H3S5 423 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 ALG2Q9H553 416 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 COQ10BQ9H8M1 238 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 SERINC1Q9NRX5 453 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 ACER3Q9NUN7 267 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 ABCD2Q9UBJ2 740 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 CLEC4AQ9UMR7 237 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 UNC79Q9P2D8 2635 aa11.88□□□□□ -0.51
RPAIN-216ENST00000575599 CRYBG3Q68DQ2 2970 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 A0A1W2PNR3 127 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 ETV2O00321 342 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-216ENST00000575599 SYT5O00445 386 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 NME4O00746 187 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 CRHP06850 196 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 GKN3PP0CG01 181 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 ARAFP10398 606 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 SELPLGQ14242 412 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 ZNF239Q16600 458 aaKnown RBP11.87□□□□□ -0.51
RPAIN-216ENST00000575599 FBXL19-AS1Q494R0 122 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 GRINAQ7Z429 371 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 LSRQ86X29 649 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-216ENST00000575599 ZNF295-AS1Q8N0V1 137 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 OR2T12Q8NG77 320 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 ROBO4Q8WZ75 1007 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 CPNE4Q96A23 557 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-216ENST00000575599 CCDC124Q96CT7 223 aaKnown RBP11.87□□□□□ -0.51
RPAIN-216ENST00000575599 REXO5Q96IC2 774 aaKnown RBP11.87□□□□□ -0.51
RPAIN-216ENST00000575599 OR5B2Q96R09 309 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 SPATA9Q9BWV2 254 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 RBM24Q9BX46 236 aaKnown RBP11.87□□□□□ -0.51
RPAIN-216ENST00000575599 KAT8Q9H7Z6 458 aaKnown RBP11.87□□□□□ -0.51
RPAIN-216ENST00000575599 TIGARQ9NQ88 270 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 CTPS2Q9NRF8 586 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 JKAMPQ9P055 326 aa11.87□□□□□ -0.51
RPAIN-216ENST00000575599 FOXD3Q9UJU5 478 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-216ENST00000575599 CDHR4A6H8M9 788 aa11.86□□□□□ -0.51
RPAIN-216ENST00000575599 FAM220BPB1ANY3 271 aa11.86□□□□□ -0.51
RPAIN-216ENST00000575599 THBS1P07996 1170 aa11.86□□□□□ -0.51
RPAIN-216ENST00000575599 PABPC4LP0CB38 370 aaKnown RBP11.86□□□□□ -0.51
RPAIN-216ENST00000575599 TFPIP10646 304 aa11.86□□□□□ -0.51
RPAIN-216ENST00000575599 UQCRBP14927 111 aa11.86□□□□□ -0.51
RPAIN-216ENST00000575599 GPX2P18283 190 aa11.86□□□□□ -0.51
RPAIN-216ENST00000575599 CCNA2P20248 432 aa11.86□□□□□ -0.51
RPAIN-216ENST00000575599 APOBEC1P41238 236 aaKnown RBP11.86□□□□□ -0.51
RPAIN-216ENST00000575599 KIR2DL2P43627 348 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-216ENST00000575599 GSK3BP49841 420 aa11.86□□□□□ -0.51
RPAIN-216ENST00000575599 EEF1A1P68104 462 aaKnown RBP11.86□□□□□ -0.51
RPAIN-216ENST00000575599 CDK6Q00534 326 aa11.86□□□□□ -0.51
RPAIN-216ENST00000575599 TLE4Q04727 773 aa11.86□□□□□ -0.51
RPAIN-216ENST00000575599 EPS8Q12929 822 aa11.86□□□□□ -0.51
RPAIN-216ENST00000575599 BNIP2Q12982 314 aa11.86□□□□□ -0.51
RPAIN-216ENST00000575599 CEACAM7Q14002 265 aa11.86□□□□□ -0.51
RPAIN-216ENST00000575599 SCARB2Q14108 478 aa11.86□□□□□ -0.51
RPAIN-216ENST00000575599 SYT14P1Q58G82 188 aa11.86□□□□□ -0.51
RPAIN-216ENST00000575599 ZNF311Q5JNZ3 666 aa11.86□□□□□ -0.51
RPAIN-216ENST00000575599 RNF220Q5VTB9 566 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms