RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 UQCC2Q9BRT2 126 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 TTYH2Q9BSA4 534 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 SYT11Q9BT88 431 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 TIPINQ9BVW5 301 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 SPZ1Q9BXG8 430 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 RAB34Q9BZG1 259 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 OR2B2Q9GZK3 357 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 EGLN3Q9H6Z9 239 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 C6orf50Q9HD87 102 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 SIX2Q9NPC8 291 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 DMAP1Q9NPF5 467 aaPredicted RBP4.33□□□□□ -1.72
TSR1-203ENST00000575049 SAR1AQ9NR31 198 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 SDHAF3Q9NRP4 125 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 FGF21Q9NSA1 209 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 TMEM30AQ9NV96 361 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 FGFR1OP2Q9NVK5 253 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 IL36RNQ9UBH0 155 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 LNPEPQ9UIQ6 1025 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 IKZF2Q9UKS7 526 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 PRPF19Q9UMS4 504 aaKnown RBP4.33□□□□□ -1.72
TSR1-203ENST00000575049 OR2W1Q9Y3N9 320 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 USH1CQ9Y6N9 552 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 MYH7P12883 1935 aa4.33□□□□□ -1.72
TSR1-203ENST00000575049 DOCK2Q92608 1830 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 UBR2Q8IWV8 1755 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 DLEC1Q9Y238 1755 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 A0A1W2PNV4 684 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 PLSCR5A0PG75 271 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 FAM74A7A6NL05 159 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 SHISA7A6NL88 538 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 NPIPA7E9PJI5 369 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 CFLARO15519 480 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 KRT33AO76009 404 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 CLPTM1O96005 669 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 ATP1B1P05026 303 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 FCER2P06734 321 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 SERPINE2P07093 398 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 NPIPA8P0DM63 369 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 ADORA3P0DMS8 318 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 MBL2P11226 248 aaPredicted RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 TAC1P20366 129 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 CA4P22748 312 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 STOMP27105 288 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 RRM2P31350 389 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 VHLP40337 213 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 HAAOP46952 286 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 GYG1P46976 350 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 ARRB1P49407 418 aaPredicted RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 EFNB2P52799 333 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 ACLYP53396 1101 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 IST1P53990 364 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 RAG2P55895 527 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 BRWD1-AS2P59051 145 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 SEC61A1P61619 476 aaKnown RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 DYNLL1P63167 89 aaKnown RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 GSTO1P78417 241 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 PHEXP78562 749 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 MRPS15P82914 257 aaKnown RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 CDK16Q00536 496 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 OC90Q02509 493 aaPredicted RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 CAV1Q03135 178 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 SRSF1Q07955 248 aaKnown RBP eCLIP4.32□□□□□ -1.72
TSR1-203ENST00000575049 INPP5JQ15735 1006 aaPredicted RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 HLFQ16534 295 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 C3AR1Q16581 482 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 EXOC3L4Q17RC7 722 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 KNOP1Q1ED39 458 aaKnown RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 FAM74A3Q4VXF1 159 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 SLC22A10Q63ZE4 541 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 TWF2Q6IBS0 349 aaKnown RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 STEAP1BQ6NZ63 245 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 RHBDF2Q6PJF5 856 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 LANCL3Q6ZV70 420 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 PIWIL4Q7Z3Z4 852 aaKnown RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 CTU1Q7Z7A3 348 aaKnown RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 ZNF554Q86TJ5 538 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 FJX1Q86VR8 437 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 RANBP3LQ86VV4 465 aaPredicted RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 TMEM17Q86X19 198 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 MFSD6LQ8IWD5 586 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 NELFCDQ8IXH7 590 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 CCDC65Q8IXS2 484 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 DCP1BQ8IZD4 617 aaKnown RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 CENPSQ8N2Z9 138 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 RIBC1Q8N443 379 aaPredicted RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 PRELID2Q8N945 189 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 Q8N9G6 341 aaPredicted RBP4.32□□□□□ -1.72
TSR1-203ENST00000575049 DNAAF3Q8N9W5 541 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 OR7A2PQ8NGA2 310 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 OR5M9Q8NGP3 310 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 FBXO25Q8TCJ0 367 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 DYDC1Q8WWB3 177 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 MAIP1Q8WWC4 291 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 LZICQ8WZA0 190 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 HSD17B8Q92506 261 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 ELMO2Q96JJ3 720 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 C4orf45Q96LM5 186 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 LURAP1Q96LR2 239 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 TMEM246Q9BRR3 403 aa4.32□□□□□ -1.72
TSR1-203ENST00000575049 RPP25Q9BUL9 199 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms