RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 CYP4Z1Q86W10 505 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 ADGRG3Q86Y34 549 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 POP5Q969H6 163 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 DDIT4LQ96D03 193 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 KLHL15Q96M94 604 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 SEPHS2Q99611 448 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 PRDM14Q9GZV8 571 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 TINAGQ9UJW2 476 aa13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 FAM32AQ9Y421 112 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-218ENST00000574964 INTS1Q8N201 2190 aaKnown RBP13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 TMEM72A0PK05 275 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 TRAPPC13A5PLN9 417 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 PYCARD-AS1I3L0S3 204 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 EFNA2O43921 213 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 WISP1O95388 367 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 HOXD4P09016 255 aaPredicted RBP13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 PNMTP11086 282 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 ACVR2AP27037 513 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 PTGER4P35408 488 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 YAP1P46937 504 aaKnown RBP13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 EIF1AXP47813 144 aaKnown RBP13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 MAP2K6P52564 334 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 CLDN20P56880 219 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 FOXD4Q12950 439 aaPredicted RBP13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 SYT14P1Q58G82 188 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 C1QL3Q5VWW1 255 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 Q6ZPB1 254 aaPredicted RBP13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 ESPNLQ6ZVH7 1005 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 SPATA24Q86W54 205 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 DOLPP1Q86YN1 238 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 OR2V1Q8NHB1 315 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 ADAMTS16Q8TE57 1224 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 OR5B2Q96R09 309 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 AMBRA1Q9C0C7 1298 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 POLR2J2Q9GZM3 115 aaKnown RBP13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 POLR2J3Q9H1A7 115 aaKnown RBP13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 C12orf10Q9HB07 376 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 TIGARQ9NQ88 270 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 SLC7A8Q9UHI5 535 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 POMPQ9Y244 141 aa13.07□□□□□ -0.32
NPLOC4-218ENST00000574964 KALRNO60229 2985 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 A0A0B4J2E0 115 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 A0A0J9YW62 118 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 A0A1B0GUH1 482 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 A0A1B0GX12 115 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 A0A1W2PNR3 127 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 J3QKU1 62 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 CCL21O00585 134 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 ACOT8O14734 319 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 TNFSF11O14788 317 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 ZNF208O43345 1280 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 OR5F1O95221 314 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 PLA2G2AP14555 144 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 ITGA2P17301 1181 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 CA7P43166 264 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 CLK1P49759 484 aaKnown RBP13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 SUCLG1P53597 346 aaKnown RBP13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 CDH12P55289 794 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 CLDN15P56746 228 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 CHRNB3Q05901 458 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 PIN1Q13526 163 aaPredicted RBP13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 ZSCAN26Q16670 478 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 EMC4Q5J8M3 183 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 C1orf185Q5T7R7 199 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 HBMQ6B0K9 141 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 C3P1Q6ZMU1 363 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 ASRGL1Q7L266 308 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 P4HA3Q7Z4N8 544 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 YTHDF3Q7Z739 585 aaKnown RBP13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 ATG4DQ86TL0 474 aaPredicted RBP13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 FAM86B1Q8N7N1 296 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 SLC41A3Q96GZ6 507 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 PRRC1Q96M27 445 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 TRIB1Q96RU8 372 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 TUBA1CQ9BQE3 449 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 FNDC11Q9BVV2 318 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 PRRG4Q9BZD6 226 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 PAQR5Q9NXK6 330 aaPredicted RBP13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 RIMS3Q9UJD0 308 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 SLC7A7Q9UM01 511 aa13.06□□□□□ -0.32
NPLOC4-218ENST00000574964 AQP12BA6NM10 295 aa13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 CLCA1A8K7I4 914 aa13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 A8MVM7 634 aa13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 H0YC42 278 aa13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 hCG_2039718K7EN88 272 aa13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 SULT2B1O00204 365 aa13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 CHP2O43745 196 aa13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 CXCL13O43927 109 aa13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 AHSA1O95433 338 aa13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 SYNGR4O95473 234 aa13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 FABP3P05413 133 aa13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 STSP08842 583 aa13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 SHC1P29353 583 aa13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 TPD52P55327 224 aaPredicted RBP13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 CARD18P57730 90 aa13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 ST3GAL3Q11203 375 aa13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 FAM98BQ52LJ0 330 aaKnown RBP13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 SWT1Q5T5J6 900 aaKnown RBP13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 C1orf146Q5VVC0 180 aa13.05□□□□□ -0.32
NPLOC4-218ENST00000574964 TMEM211Q6ICI0 200 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms