RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 EFNA2O43921 213 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 RHCEP18577 417 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 CLK1P49759 484 aaKnown RBP15.4■□□□□ 0.06
NUP88-210ENST00000574867 ST3GAL3Q11203 375 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 PIN1Q13526 163 aaPredicted RBP15.4■□□□□ 0.06
NUP88-210ENST00000574867 ESPNLQ6ZVH7 1005 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 PIWIL3Q7Z3Z3 882 aaKnown RBP15.4■□□□□ 0.06
NUP88-210ENST00000574867 TSPYL5Q86VY4 417 aaPredicted RBP15.4■□□□□ 0.06
NUP88-210ENST00000574867 ZDHHC21Q8IVQ6 265 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 FAM57AQ8TBR7 257 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 SMPDL3BQ92485 455 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 DDIT4LQ96D03 193 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 KLHL15Q96M94 604 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 TMEM185BQ9H7F4 350 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 ZNF835Q9Y2P0 537 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 A0A087WUJ7 227 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 SLC19A2O60779 497 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 STARP49675 285 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 SYT14P1Q58G82 188 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 C5orf46Q6UWT4 87 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 TSEN54Q7Z6J9 526 aaKnown RBP15.39■□□□□ 0.05
NUP88-210ENST00000574867 ATCAYQ86WG3 371 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 RNF217Q8TC41 542 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 CANT1Q8WVQ1 401 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 WDYHV1Q96HA8 205 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 ZNF347Q96SE7 839 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 FNDC11Q9BVV2 318 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 TNFRSF10DQ9UBN6 386 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 RIMS3Q9UJD0 308 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 SLC7A7Q9UM01 511 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 AURKCQ9UQB9 309 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 TMEM72A0PK05 275 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 PRRG2O14669 202 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 TPOP07202 933 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 SLC7A1P30825 629 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 ACTR3P61158 418 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 PDSS1Q5T2R2 415 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 Q6ZPB1 254 aaPredicted RBP15.39■□□□□ 0.05
NUP88-210ENST00000574867 GDF7Q7Z4P5 450 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 GGNQ86UU5 652 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 PIP5K1AQ99755 562 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 ANKRD19PQ9H560 264 aa15.39■□□□□ 0.05
NUP88-210ENST00000574867 SMG1Q96Q15 3661 aaKnown RBP15.38■□□□□ 0.05
NUP88-210ENST00000574867 MED12Q93074 2177 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 FIGNL2A6NMB9 653 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 A8MVM7 634 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 H0Y3Z8 333 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 J3KTA2 159 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 SEC14L5O43304 696 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 PRSS23O95084 383 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 THY1P04216 161 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 CCNA2P20248 432 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 SFTPDP35247 375 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 YAP1P46937 504 aaKnown RBP15.38■□□□□ 0.05
NUP88-210ENST00000574867 RPS3AP61247 264 aaKnown RBP15.38■□□□□ 0.05
NUP88-210ENST00000574867 CCNIQ14094 377 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 SF3B4Q15427 424 aaKnown RBP eCLIP15.38■□□□□ 0.053e-9■■■■□ 22.6
NUP88-210ENST00000574867 IQCCQ4KMZ1 466 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 CD163Q86VB7 1156 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 UBQLNLQ8IYU4 475 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 STK35Q8TDR2 534 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 TMEM43Q9BTV4 400 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 YY1AP1Q9H869 796 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 PAQR5Q9NXK6 330 aaPredicted RBP15.38■□□□□ 0.05
NUP88-210ENST00000574867 CAMK2AQ9UQM7 478 aa15.38■□□□□ 0.05
NUP88-210ENST00000574867 EIF1AYO14602 144 aaKnown RBP15.37■□□□□ 0.05
NUP88-210ENST00000574867 FFAR1O14842 300 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 ADAMDEC1O15204 470 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 WDR1O75083 606 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 LYPD3O95274 346 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 TFPIP10646 304 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 PTGER4P35408 488 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 RBM34P42696 430 aaKnown RBP15.37■□□□□ 0.05
NUP88-210ENST00000574867 CLDN20P56880 219 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 CTU2Q2VPK5 515 aaKnown RBP15.37■□□□□ 0.05
NUP88-210ENST00000574867 TMEM176BQ3YBM2 270 aaPredicted RBP15.37■□□□□ 0.05
NUP88-210ENST00000574867 ATP6V1C2Q8NEY4 427 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 ADGRG7Q96K78 797 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 ZNF426Q9BUY5 554 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 PNPLA3Q9NST1 481 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 CCM2LQ9NUG4 571 aaPredicted RBP15.37■□□□□ 0.05
NUP88-210ENST00000574867 HDGFL3Q9Y3E1 203 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 GABRA1P14867 456 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 CASP6P55212 293 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 SRYQ05066 204 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 KPNB1Q14974 876 aaKnown RBP15.37■□□□□ 0.05
NUP88-210ENST00000574867 TRAM2Q15035 370 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 GXYLT1Q4G148 440 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 LINC00114Q6XXX2 140 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 ZNF605Q86T29 641 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 PIK3C3Q8NEB9 887 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 OR2V1Q8NHB1 315 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 POTEKPQ9BYX7 375 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 SLC19A3Q9BZV2 496 aa15.37■□□□□ 0.05
NUP88-210ENST00000574867 ZGRF1Q86YA3 2104 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 AHRRA9YTQ3 701 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 NPIPB7O75200 414 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 SHC1P29353 583 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 ERFP50548 548 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 SUCLG1P53597 346 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms