RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 CDK5R1Q15078 307 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 C2orf27AQ580R0 203 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 ZNF613Q6PF04 617 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 FGD2Q7Z6J4 655 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 SHISA5Q8N114 240 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 OR52E2Q8NGJ4 325 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 OR14A2Q96R54 314 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 ZNF559Q9BR84 538 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 SRMSQ9H3Y6 488 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 AUNIPQ9H7T9 357 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 RNF215Q9Y6U7 377 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 TRBV23OR9-2A0A075B6M9 112 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 TFP02787 698 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 SMIM10L1P0DMW3 83 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 SLC6A6P31641 620 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 GABRA3P34903 492 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 GJA4P35212 333 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 IGFALSP35858 605 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 SIRPAP78324 504 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 EXOSC7Q15024 291 aaKnown RBP14.42□□□□□ -0.1
NUP88-207ENST00000573584 BAIAP2L2Q6UXY1 529 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 CMIPQ8IY22 773 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 SLC38A6Q8IZM9 456 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 ZNF614Q8N883 585 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 FAM98AQ8NCA5 519 aaKnown RBP14.42□□□□□ -0.1
NUP88-207ENST00000573584 OR4K13Q8NH42 304 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 OR14C36Q8NHC7 312 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 SMIM4Q8WVI0 70 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 NXPE2Q96DL1 559 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 SMIM10Q96HG1 83 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 ERMAPQ96PL5 475 aaPredicted RBP14.42□□□□□ -0.1
NUP88-207ENST00000573584 OR2A5Q96R48 311 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 APOOQ9BUR5 198 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 IL21RQ9HBE5 538 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 FGF22Q9HCT0 170 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 MRPL15Q9P015 296 aaKnown RBP14.42□□□□□ -0.1
NUP88-207ENST00000573584 SCP2D1Q9UJQ7 156 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 TRBV2A0A0J9YWF9 115 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 GSTZ1O43708 216 aaPredicted RBP14.42□□□□□ -0.1
NUP88-207ENST00000573584 CTSVO60911 334 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 ADH1BP00325 375 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 IFNA7P01567 189 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 HPXP02790 462 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 UCHL1P09936 223 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 ENPP1P22413 925 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 PLAURQ03405 335 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 GPR139Q6DWJ6 353 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 SFRP4Q6FHJ7 346 aaPredicted RBP14.42□□□□□ -0.1
NUP88-207ENST00000573584 ARHGAP11AQ6P4F7 1023 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 IDO2Q6ZQW0 420 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 SIX5Q8N196 739 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 SDR9C7Q8NEX9 313 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 LGALS14Q8TCE9 139 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 SNX33Q8WV41 574 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 CNOT9Q92600 299 aaKnown RBP14.42□□□□□ -0.1
NUP88-207ENST00000573584 FGF13Q92913 245 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 TM4SF19Q96DZ7 209 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 PTCHD1Q96NR3 888 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 STACQ99469 402 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 CCDC86Q9H6F5 360 aaKnown RBP14.42□□□□□ -0.1
NUP88-207ENST00000573584 CAPN10Q9HC96 672 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 MCCC2Q9HCC0 563 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 IL23AQ9NPF7 189 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 C14orf105Q9NVL8 296 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 AUP1Q9Y679 476 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 DNAH14Q0VDD8 3507 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 A0A0B4J2E0 115 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 A0A1B0GX12 115 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 GXYLT2A0PJZ3 443 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 I3L521 148 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 OR2T7P0C7T2 308 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 NAA10P41227 235 aaPredicted RBP14.41□□□□□ -0.1
NUP88-207ENST00000573584 RPS11P62280 158 aaKnown RBP eCLIP14.41□□□□□ -0.1
NUP88-207ENST00000573584 ACTA2P62736 377 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 ACTG2P63267 376 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 IKZF1Q13422 519 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 EXOSC2Q13868 293 aaKnown RBP14.41□□□□□ -0.1
NUP88-207ENST00000573584 UBE2Q1Q7Z7E8 422 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 ZAR1Q86SH2 424 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 OR2T35Q8NGX2 323 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 OR2T27Q8NH04 317 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 PDCD1LG2Q9BQ51 273 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 C20orf85Q9H1P6 137 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 FLRT3Q9NZU0 649 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 A0A1B0GWA3 101 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 URADA6NGE7 173 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 CTDSPLO15194 276 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 FGF17O60258 216 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 BRINP1O60477 761 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 TOXO94900 526 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 MPC2O95563 127 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 VSX2P58304 361 aaPredicted RBP14.41□□□□□ -0.1
NUP88-207ENST00000573584 EXOSC6Q5RKV6 272 aaKnown RBP14.41□□□□□ -0.1
NUP88-207ENST00000573584 OVCH1Q7RTY7 1134 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 CMTM4Q8IZR5 234 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 PCNPQ8WW12 178 aaKnown RBP14.41□□□□□ -0.1
NUP88-207ENST00000573584 DERL3Q96Q80 235 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 CNN2Q99439 309 aaKnown RBP14.41□□□□□ -0.1
NUP88-207ENST00000573584 CRISPLD2Q9H0B8 497 aa14.41□□□□□ -0.1
NUP88-207ENST00000573584 NRIP3Q9NQ35 241 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms