RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ZNF613Q6PF04 617 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 ARL9Q6T311 187 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 FAM180AQ6UWF9 173 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 GRINAQ7Z429 371 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 GALNT16Q8N428 558 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 OR5M1Q8NGP8 315 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 FAM122AQ96E09 287 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 SARGQ9BW04 601 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 SLC38A1Q9H2H9 487 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 MARCH7Q9H992 704 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 CDH10Q9Y6N8 788 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 SH3PXD2BA1X283 911 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 HYAL3O43820 417 aaPredicted RBP9.29□□□□□ -0.92
SMG6-213ENST00000573166 NKX2-2O95096 273 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 CTSBP07858 339 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 FGF5P12034 268 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 ANKDD1AQ495B1 522 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 ZBED5Q49AG3 693 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 OR4C3Q8NH37 302 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 C9orf43Q8TAL5 461 aaPredicted RBP9.29□□□□□ -0.92
SMG6-213ENST00000573166 FGF11Q92914 225 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 BORCS5Q969J3 196 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 SECISBP2Q96T21 854 aaKnown RBP9.29□□□□□ -0.92
SMG6-213ENST00000573166 DEFB127Q9H1M4 99 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 GNG8Q9UK08 70 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 CENPFP49454 3210 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 SPTAN1Q13813 2472 aaKnown RBP9.29□□□□□ -0.92
SMG6-213ENST00000573166 SLC22A31A6NKX4 558 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 FAM171A2A8MVW0 826 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 VSTM5A8MXK1 200 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 CD82P27701 267 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 MAN2A2P49641 1150 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 RAB14P61106 215 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 ODF4Q2M2E3 257 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 PROX2Q3B8N5 592 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 KCTD18Q6PI47 426 aaPredicted RBP9.29□□□□□ -0.92
SMG6-213ENST00000573166 GDF7Q7Z4P5 450 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 GALNTL5Q7Z4T8 443 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 CPOQ8IVL8 374 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 RNF113BQ8IZP6 322 aaKnown RBP9.29□□□□□ -0.92
SMG6-213ENST00000573166 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.29□□□□□ -0.92
SMG6-213ENST00000573166 TMEM52Q8NDY8 209 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 C19orf18Q8NEA5 215 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 OR13C2Q8NGS9 318 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 UFD1Q92890 307 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 HIST1H2AAQ96QV6 131 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 NAA50Q9GZZ1 169 aaKnown RBP9.29□□□□□ -0.92
SMG6-213ENST00000573166 MRPS7Q9Y2R9 242 aaKnown RBP9.29□□□□□ -0.92
SMG6-213ENST00000573166 DNAH12Q6ZR08 3092 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 A8MVM7 634 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 DNAJB6O75190 326 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 CEACAM1P13688 526 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 ELK4P28324 431 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 DAP3P51398 398 aaKnown RBP9.29□□□□□ -0.92
SMG6-213ENST00000573166 CARD18P57730 90 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 ST3GAL4Q11206 333 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 SLC10A1Q14973 349 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 TGIF1Q15583 401 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 CRTC2Q53ET0 693 aaPredicted RBP9.29□□□□□ -0.92
SMG6-213ENST00000573166 CEP78Q5JTW2 689 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 DHRS4L2Q6PKH6 230 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 TMEM255BQ8WV15 326 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 YTHDF1Q9BYJ9 559 aaKnown RBP9.29□□□□□ -0.92
SMG6-213ENST00000573166 SERHL2Q9H4I8 314 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 GPATCH2Q9NW75 528 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 LUZP4Q9P127 313 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 GPC6Q9Y625 555 aaPredicted RBP9.29□□□□□ -0.92
SMG6-213ENST00000573166 NPIPB8E9PQR5 432 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 TBX1O43435 398 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 CBX7O95931 251 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 SERPINA3P01011 423 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 EDNRAP25101 427 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 GRPRP30550 384 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 SLC1A3P43003 542 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 C6orf141Q5SZD1 244 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 C5orf46Q6UWT4 87 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 TSPYL5Q86VY4 417 aaPredicted RBP9.28□□□□□ -0.92
SMG6-213ENST00000573166 PLCZ1Q86YW0 608 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 FAM131CQ96AQ9 280 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 H3BSH0 61 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 CHP2O43745 196 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 UBE2NP61088 152 aaKnown RBP9.28□□□□□ -0.92
SMG6-213ENST00000573166 PPP3R1P63098 170 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 OR1C1Q15619 314 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 TIGD6Q17RP2 521 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 MSRB3Q8IXL7 192 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 ZNF283Q8N7M2 679 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 SDR9C7Q8NEX9 313 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 ANKK1Q8NFD2 765 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 THAP4Q8WY91 577 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 FCGR1BQ92637 280 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 SEMA4CQ9C0C4 833 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 SAP130Q9H0E3 1048 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 WDR54Q9H977 334 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 GALNT9Q9HCQ5 603 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 RPRD1BQ9NQG5 326 aaKnown RBP9.28□□□□□ -0.92
SMG6-213ENST00000573166 SIDT1Q9NXL6 827 aaKnown RBP9.28□□□□□ -0.92
SMG6-213ENST00000573166 GPR55Q9Y2T6 319 aaPredicted RBP9.28□□□□□ -0.92
SMG6-213ENST00000573166 TMEM14AQ9Y6G1 99 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 TRAV36DV7A0A075B6V5 113 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms