RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 KCNJ5P48544 419 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 PCYT1AP49585 367 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 IST1P53990 364 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 SUMO3P55854 103 aaPredicted RBP6.65□□□□□ -1.34
NUP88-205ENST00000572809 CTBP2P56545 445 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 CBFBQ13951 182 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 TESK1Q15569 626 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 TOMM34Q15785 309 aaPredicted RBP6.65□□□□□ -1.34
NUP88-205ENST00000572809 GSTA3Q16772 222 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 CTU2Q2VPK5 515 aaKnown RBP6.65□□□□□ -1.34
NUP88-205ENST00000572809 NDUFAF6Q330K2 333 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 TMEM176BQ3YBM2 270 aaPredicted RBP6.65□□□□□ -1.34
NUP88-205ENST00000572809 SLC9B1Q4ZJI4 515 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 AP1ARQ63HQ0 302 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 TNFAIP8L2Q6P589 184 aaPredicted RBP6.65□□□□□ -1.34
NUP88-205ENST00000572809 OLIG3Q7RTU3 272 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 CDC20BQ86Y33 519 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 TRIML2Q8N7C3 387 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 GLB1L3Q8NCI6 653 aaPredicted RBP6.65□□□□□ -1.34
NUP88-205ENST00000572809 TOR1AIP2Q8NFQ8 470 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 OR5W2Q8NH69 310 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 RAB8BQ92930 207 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 UBE2FQ969M7 185 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 ARL8AQ96BM9 186 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 ROPN1LQ96C74 230 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 ARSGQ96EG1 525 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 NEURL3Q96EH8 262 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 REXO5Q96IC2 774 aaKnown RBP6.65□□□□□ -1.34
NUP88-205ENST00000572809 GMPPAQ96IJ6 420 aaPredicted RBP6.65□□□□□ -1.34
NUP88-205ENST00000572809 MAELQ96JY0 434 aaKnown RBP6.65□□□□□ -1.34
NUP88-205ENST00000572809 MRGPRX4Q96LA9 322 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 KLHL15Q96M94 604 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 CCDC115Q96NT0 180 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 PANX1Q96RD7 426 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 ZBTB18Q99592 522 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 SLC39A3Q9BRY0 314 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 SLC35A5Q9BS91 424 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 THUMPD3Q9BV44 507 aaKnown RBP6.65□□□□□ -1.34
NUP88-205ENST00000572809 ZNF350Q9GZX5 532 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 LAT2Q9GZY6 243 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 OPN3Q9H1Y3 402 aaPredicted RBP6.65□□□□□ -1.34
NUP88-205ENST00000572809 LIME1Q9H400 295 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 TMEM185BQ9H7F4 350 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 TIGARQ9NQ88 270 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 POLE3Q9NRF9 147 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 GLRX2Q9NS18 164 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 KCNE5Q9UJ90 142 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 PROCRQ9UNN8 238 aa6.65□□□□□ -1.34
NUP88-205ENST00000572809 POLQO75417 2590 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 ADGRG4Q8IZF6 3080 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 MPDZO75970 2070 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 UQCRHLA0A096LP55 91 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 C9JVG2 144 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 C16orf97H3BN30 126 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 HMGN4O00479 90 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 UBDO15205 165 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 DIAPH2O60879 1101 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 SS18L1O75177 396 aaPredicted RBP6.64□□□□□ -1.35
NUP88-205ENST00000572809 GOSR1O95249 250 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 C1QCP02747 245 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 IL6P05231 212 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 THBDP07204 575 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 UBTFL6P0CB48 400 aaPredicted RBP6.64□□□□□ -1.35
NUP88-205ENST00000572809 IDO1P14902 403 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 PGCP20142 388 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 ELK4P28324 431 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 SLC6A8P48029 635 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 KHKP50053 298 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 ANXA11P50995 505 aaKnown RBP6.64□□□□□ -1.35
NUP88-205ENST00000572809 CCR4P51679 360 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 ART1P52961 327 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 FOXF1Q12946 379 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 QPRTQ15274 297 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 GUSBP1Q15486 140 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 MAPK14Q16539 360 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 NKPD1Q17RQ9 610 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 PDCD4Q53EL6 469 aaKnown RBP6.64□□□□□ -1.35
NUP88-205ENST00000572809 GPAT3Q53EU6 434 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 SLC25A53Q5H9E4 307 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 TYW3Q6IPR3 259 aaKnown RBP6.64□□□□□ -1.35
NUP88-205ENST00000572809 EPGNQ6UW88 154 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 SPNS3Q6ZMD2 512 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 EIF3MQ7L2H7 374 aaKnown RBP6.64□□□□□ -1.35
NUP88-205ENST00000572809 RNF130Q86XS8 419 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 ZNF619Q8N2I2 560 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 TMCO5AQ8N6Q1 288 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 ATP6V1C2Q8NEY4 427 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 OIT3Q8WWZ8 545 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 TMEM234Q8WY98 164 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 ROBO4Q8WZ75 1007 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 CPNE4Q96A23 557 aaPredicted RBP6.64□□□□□ -1.35
NUP88-205ENST00000572809 ZNF524Q96C55 264 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 ZG16BQ96DA0 208 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 C1orf159Q96HA4 380 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 ATP6V1G3Q96LB4 118 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 WFIKKN1Q96NZ8 548 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 INPP5KQ9BT40 448 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 KLHL4Q9C0H6 718 aa6.64□□□□□ -1.35
NUP88-205ENST00000572809 MTHFD2LQ9H903 347 aaPredicted RBP6.64□□□□□ -1.35
NUP88-205ENST00000572809 SERINC1Q9NRX5 453 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms