RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ZNF704Q6ZNC4 412 aaPredicted RBP15.15■□□□□ 0.02
MAP1LC3B-208ENST00000570189 ZNF440Q8IYI8 595 aa15.15■□□□□ 0.02
MAP1LC3B-208ENST00000570189 ZNF611Q8N823 705 aa15.15■□□□□ 0.02
MAP1LC3B-208ENST00000570189 ZNF563Q8TA94 476 aa15.15■□□□□ 0.02
MAP1LC3B-208ENST00000570189 WDR60Q8WVS4 1066 aa15.15■□□□□ 0.02
MAP1LC3B-208ENST00000570189 C7orf26Q96N11 449 aa15.15■□□□□ 0.02
MAP1LC3B-208ENST00000570189 POTEKPQ9BYX7 375 aa15.15■□□□□ 0.02
MAP1LC3B-208ENST00000570189 GSX2Q9BZM3 304 aa15.15■□□□□ 0.02
MAP1LC3B-208ENST00000570189 RMND5AQ9H871 391 aa15.15■□□□□ 0.02
MAP1LC3B-208ENST00000570189 UBTD1Q9HAC8 227 aa15.15■□□□□ 0.02
MAP1LC3B-208ENST00000570189 NGBQ9NPG2 151 aa15.15■□□□□ 0.02
MAP1LC3B-208ENST00000570189 CTPS2Q9NRF8 586 aa15.15■□□□□ 0.02
MAP1LC3B-208ENST00000570189 CALML5Q9NZT1 146 aa15.15■□□□□ 0.02
MAP1LC3B-208ENST00000570189 EMC3Q9P0I2 261 aa15.15■□□□□ 0.02
MAP1LC3B-208ENST00000570189 IGHV3-15A0A0B4J1V0 119 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 CLDN24A6NM45 220 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 ZNF716A6NP11 495 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 C9JVG2 144 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 UBDO15205 165 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 TGDSO95455 350 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 ADAP00813 363 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 FESP07332 822 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 SLC1A3P43003 542 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 COX20Q5RI15 118 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 DNAJC14Q6Y2X3 702 aaPredicted RBP15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 GALNT5Q7Z7M9 940 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 P2RY8Q86VZ1 359 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 PIGXQ8TBF5 258 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 CNOT9Q92600 299 aaKnown RBP15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 KISS1RQ969F8 398 aaPredicted RBP15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 ZHX1-C8orf76Q96EF9 292 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 PLPPR2Q96GM1 343 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 C18orf12Q96KH6 178 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 SLC6A13Q9NSD5 602 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 P2RX2Q9UBL9 471 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 CADP27708 2225 aa15.14■□□□□ 0.01
MAP1LC3B-208ENST00000570189 CDHR4A6H8M9 788 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 GPR171O14626 319 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 HS3ST1O14792 307 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 PGM3O95394 542 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 GSNP06396 782 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 NR2F1P10589 423 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 UQCRBP14927 111 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 IL7RP16871 459 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 IL32P24001 234 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 POLR2HP52434 150 aaKnown RBP15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 POLR2JP52435 117 aaKnown RBP15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 EPS8Q12929 822 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 TAB1Q15750 504 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 Q5PR19 223 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 NCMAPQ5T1S8 102 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 PRAMEF8Q5VWM4 474 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 PRAMEF7Q5VXH5 474 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 NXNQ6DKJ4 435 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 EPGNQ6UW88 154 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 PEX5LQ8IYB4 626 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 ZBTB9Q96C00 473 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 ITCHQ96J02 903 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 ARL5BQ96KC2 179 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 OR52B2Q96RD2 323 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 ZNF300Q96RE9 604 aaPredicted RBP15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 ADAM19Q9H013 955 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 TPT1P8Q9HAU6 139 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 ZNF701Q9NV72 531 aaPredicted RBP15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 TMEM45AQ9NWC5 275 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 OSGIN1Q9UJX0 560 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 GMEB1Q9Y692 573 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 USH1CQ9Y6N9 552 aa15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 NSD1Q96L73 2696 aaPredicted RBP15.13■□□□□ 0.01
MAP1LC3B-208ENST00000570189 FAM234BA2RU67 622 aa15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 CFAP73A6NFT4 308 aa15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 EIF1BO60739 113 aaKnown RBP15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 THBS1P07996 1170 aa15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 TFPTP0C1Z6 253 aa15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 BMP2P12643 396 aa15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 HOXB9P17482 250 aaPredicted RBP15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 RYKP34925 604 aa15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 IDH2P48735 452 aaKnown RBP15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 CRISP3P54108 245 aa15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 IRX1P78414 480 aaPredicted RBP15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 MRPL2Q5T653 305 aaKnown RBP15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 C1QTNF12Q5T7M4 302 aa15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 RNF220Q5VTB9 566 aa15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 BHLHA15Q7RTS1 189 aaPredicted RBP15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 WFDC8Q8IUA0 241 aa15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 P3H2Q8IVL5 708 aa15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 MIER2Q8N344 545 aa15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 SLC35B4Q969S0 331 aa15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 DDIT4LQ96D03 193 aa15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 ESRP2Q9H6T0 727 aaKnown RBP15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 TMEM181Q9P2C4 612 aa15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 MALT1Q9UDY8 824 aa15.12■□□□□ 0.01
MAP1LC3B-208ENST00000570189 TMED7-TICAM2A0A0A6YYA0 188 aa15.11■□□□□ 0.01
MAP1LC3B-208ENST00000570189 AP3D1O14617 1153 aa15.11■□□□□ 0.01
MAP1LC3B-208ENST00000570189 DSTNP60981 165 aa15.11■□□□□ 0.01
MAP1LC3B-208ENST00000570189 FADDQ13158 208 aa15.11■□□□□ 0.01
MAP1LC3B-208ENST00000570189 LIN52Q52LA3 116 aa15.11■□□□□ 0.01
MAP1LC3B-208ENST00000570189 TIMM23BQ5SRD1 257 aa15.11■□□□□ 0.01
MAP1LC3B-208ENST00000570189 FBXW9Q5XUX1 488 aa15.11■□□□□ 0.01
MAP1LC3B-208ENST00000570189 PNPT1Q8TCS8 783 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms