RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 TWIST2Q8WVJ9 160 aa13.82□□□□□ -0.2
HERPUD1-215ENST00000568676 PIMREGQ9BSJ6 248 aa13.82□□□□□ -0.2
HERPUD1-215ENST00000568676 EXD2Q9NVH0 621 aa13.82□□□□□ -0.2
HERPUD1-215ENST00000568676 CHRNA9Q9UGM1 479 aa13.82□□□□□ -0.2
HERPUD1-215ENST00000568676 FBXO9Q9UK97 447 aaPredicted RBP13.82□□□□□ -0.2
HERPUD1-215ENST00000568676 TRAPPC4Q9Y296 219 aa13.82□□□□□ -0.2
HERPUD1-215ENST00000568676 SLC35A3Q9Y2D2 325 aa13.82□□□□□ -0.2
HERPUD1-215ENST00000568676 ATP23Q9Y6H3 246 aa13.82□□□□□ -0.2
HERPUD1-215ENST00000568676 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.82□□□□□ -0.2
HERPUD1-215ENST00000568676 PLCE1Q9P212 2302 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 VWC2LB2RUY7 222 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 PDLIM1O00151 329 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 EIF1BO60739 113 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 CYP7B1O75881 506 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 C6orf47O95873 294 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 WNT11O96014 354 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 ITGA5P08648 1049 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 UBTFL6P0CB48 400 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 RNF144AP50876 292 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 MAP2K6P52564 334 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 GPR68Q15743 365 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 ARHGAP11BQ3KRB8 267 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 ATP6AP1LQ52LC2 224 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 FAM120AOSQ5T036 256 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 AP1ARQ63HQ0 302 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 GRINAQ7Z429 371 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 HTRA1Q92743 480 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 CCDC106Q9BWC9 280 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 GATA5Q9BWX5 397 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 ZNF350Q9GZX5 532 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 POLE3Q9NRF9 147 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 UPB1Q9UBR1 384 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 SLC9A8Q9Y2E8 581 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 TRAF6Q9Y4K3 522 aa13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 YLPM1P49750 1951 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-215ENST00000568676 LOC100289279A0A1B0GTE1 492 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 LOC390937A0A1W2PQ73 354 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 PIP5K1BO14986 540 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 CFLARO15519 480 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 NPHS1O60500 1241 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 UGT2B17O75795 530 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 PGRP06401 933 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 APEHP13798 732 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 MATN1P21941 496 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 NR4A2P43354 598 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 HTR3AP46098 478 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 PRPS1P60891 318 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 SWI5Q1ZZU3 235 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 UGT3A2Q3SY77 523 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 XKR7Q5GH72 579 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 C10orf107Q8IVU9 208 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 FAM71CQ8NEG0 241 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 OR5D16Q8NGK9 328 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 ZNF563Q8TA94 476 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 BOD1Q96IK1 185 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 OBP2BQ9NPH6 170 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 EXOSC3Q9NQT5 275 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 SLC17A5Q9NRA2 495 aa13.8□□□□□ -0.2
HERPUD1-215ENST00000568676 A0A1W2PR80 420 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 PGM1P36871 562 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 SNRPD2P62316 118 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 HBA1P69905 142 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 H3F3AP84243 136 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 GGTLC2Q14390 218 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 PTGR1Q14914 329 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 PCLAFQ15004 111 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 ATAD3BQ5T9A4 648 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 KLHL24Q6TFL4 600 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 CASP12Q6UXS9 341 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 C16orf62Q7Z3J2 963 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 ARIH2OSQ8N7S6 290 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 WDR31Q8NA23 367 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 MIPOL1Q8TD10 442 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 PMM1Q92871 262 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 MSI2Q96DH6 328 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 C16orf45Q96MC5 204 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 NAA11Q9BSU3 229 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 DUSP26Q9BV47 211 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 TXLNGYQ9BZA5 131 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 CHODLQ9H9P2 273 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 MOV10Q9HCE1 1003 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 CTPS2Q9NRF8 586 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 TMEM181Q9P2C4 612 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 KCNE5Q9UJ90 142 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 MKLN1Q9UL63 735 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 PCDHGB4Q9UN71 923 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 ALPK2Q86TB3 2170 aa13.79□□□□□ -0.2
HERPUD1-215ENST00000568676 KIAA0513O60268 411 aa13.78□□□□□ -0.2
HERPUD1-215ENST00000568676 FCMRO60667 390 aa13.78□□□□□ -0.2
HERPUD1-215ENST00000568676 PEX11AO75192 247 aa13.78□□□□□ -0.2
HERPUD1-215ENST00000568676 PDE5AO76074 875 aa13.78□□□□□ -0.2
HERPUD1-215ENST00000568676 KRT4P19013 534 aa13.78□□□□□ -0.2
HERPUD1-215ENST00000568676 MPGP29372 298 aa13.78□□□□□ -0.2
HERPUD1-215ENST00000568676 SOAT1P35610 550 aa13.78□□□□□ -0.2
HERPUD1-215ENST00000568676 SERPINB5P36952 375 aa13.78□□□□□ -0.2
HERPUD1-215ENST00000568676 SLC35A1P78382 337 aa13.78□□□□□ -0.2
HERPUD1-215ENST00000568676 MAD2L1Q13257 205 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-215ENST00000568676 FAM153CQ494X1 144 aa13.78□□□□□ -0.2
HERPUD1-215ENST00000568676 C6orf136Q5SQH8 315 aa13.78□□□□□ -0.2
HERPUD1-215ENST00000568676 C6orf120Q7Z4R8 191 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms