RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 CALML5Q9NZT1 146 aa4.26□□□□□ -1.73
CLK3-219ENST00000567805 ZIM2Q9NZV7 527 aa4.26□□□□□ -1.73
CLK3-219ENST00000567805 P2RX2Q9UBL9 471 aa4.26□□□□□ -1.73
CLK3-219ENST00000567805 CHRNA9Q9UGM1 479 aa4.26□□□□□ -1.73
CLK3-219ENST00000567805 PRDM4Q9UKN5 801 aa4.26□□□□□ -1.73
CLK3-219ENST00000567805 GPR52Q9Y2T5 361 aa4.26□□□□□ -1.73
CLK3-219ENST00000567805 NF1P21359 2839 aa4.26□□□□□ -1.73
CLK3-219ENST00000567805 IGKV3D-15A0A087WSY6 115 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 IGHV3-15A0A0B4J1V0 119 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 FAM234BA2RU67 622 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 AGAP5A6NIR3 686 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 CLDN24A6NM45 220 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 ZNF724A8MTY0 619 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 SULT2B1O00204 365 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 FAAHO00519 579 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 SMAD9O15198 467 aaKnown RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 UBDO15205 165 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 KLF4O43474 513 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 DNPH1O43598 174 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 DIAPH2O60879 1101 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 BCAS1O75363 584 aaPredicted RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 TGDSO95455 350 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 ANP32DO95626 131 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 CNOT4O95628 575 aaKnown RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 PMS2P2O95744 297 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 ADAP00813 363 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 C1QCP02747 245 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 GSNP06396 782 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 DBIP07108 87 aaKnown RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 FESP07332 822 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 NR2F1P10589 423 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 TFPIP10646 304 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 UQCRBP14927 111 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 FOSL1P15407 271 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 IL7RP16871 459 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 IL32P24001 234 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 LOXP28300 417 aaPredicted RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 HOXC12P31275 282 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 RYKP34925 604 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 SLC1A3P43003 542 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 OR3A2P47893 321 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 IDH2P48735 452 aaKnown RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 MRPL19P49406 292 aaKnown RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 CLK1P49759 484 aaKnown RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 POLR2HP52434 150 aaKnown RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 POLR2JP52435 117 aaKnown RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 MAP2K6P52564 334 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 CRISP3P54108 245 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 STX1BP61266 288 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 NKX6-1P78426 367 aaPredicted RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 PLAURQ03405 335 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 FOXD4Q12950 439 aaPredicted RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 ITGADQ13349 1161 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 P2RY6Q15077 328 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 PDK3Q15120 406 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 ACKR1Q16570 336 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 ZSWIM7Q19AV6 140 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 COX20Q5RI15 118 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 SFRP5Q5T4F7 317 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 SHEQ5VZ18 495 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 ABLIM2Q6H8Q1 611 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 EPGNQ6UW88 154 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 TMPPEQ6ZT21 453 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 Q6ZT83 130 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 C22orf34Q6ZV56 151 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 SSX8Q7RTT4 187 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 NUFIP2Q7Z417 695 aaKnown RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 MTDHQ86UE4 582 aaKnown RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 CXorf67Q86X51 503 aaPredicted RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 PEX5LQ8IYB4 626 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 ZNF440Q8IYI8 595 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 LRRC75A-AS1Q8N1F1 130 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 ANKFN1Q8N957 763 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 PIGXQ8TBF5 258 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 PNPT1Q8TCS8 783 aaKnown RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 LRRC8CQ8TDW0 803 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 HSD17B8Q92506 261 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 CNOT9Q92600 299 aaKnown RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 KISS1RQ969F8 398 aaPredicted RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 DDIT4LQ96D03 193 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 ZHX1-C8orf76Q96EF9 292 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 PLPPR2Q96GM1 343 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 ITCHQ96J02 903 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 C7orf26Q96N11 449 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 OR52B2Q96RD2 323 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 CCL19Q99731 98 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 UBTD1Q9HAC8 227 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 NGBQ9NPG2 151 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 CTPS2Q9NRF8 586 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 SLC6A13Q9NSD5 602 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 THUMPD1Q9NXG2 353 aaKnown RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 EMC3Q9P0I2 261 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 EGFL7Q9UHF1 273 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 ING1Q9UK53 422 aaPredicted RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 HDGFL3Q9Y3E1 203 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 USH1CQ9Y6N9 552 aa4.25□□□□□ -1.73
CLK3-219ENST00000567805 FLNAP21333 2647 aaKnown RBP4.25□□□□□ -1.73
CLK3-219ENST00000567805 DSPPQ9NZW4 1301 aa4.24□□□□□ -1.73
CLK3-219ENST00000567805 TMED7-TICAM2A0A0A6YYA0 188 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms