RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 ZNF613Q6PF04 617 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 ULK3Q6PHR2 472 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 RINLQ6ZS11 566 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 CBLL1Q75N03 491 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 P4HA3Q7Z4N8 544 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 ATP6V1C2Q8NEY4 427 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 ELOA3Q8NG57 546 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 OR10D3Q8NH80 312 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 MBD3L2Q8NHZ7 208 aaPredicted RBP10.95□□□□□ -0.66
SF3B3-208ENST00000567250 VANGL1Q8TAA9 524 aaPredicted RBP10.95□□□□□ -0.66
SF3B3-208ENST00000567250 SSC4DQ8WTU2 575 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 ASB5Q8WWX0 329 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 GEMIN6Q8WXD5 167 aaKnown RBP10.95□□□□□ -0.66
SF3B3-208ENST00000567250 RND1Q92730 232 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 WNT2BQ93097 391 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 C3orf49Q96BT1 292 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 ZHX1-C8orf76Q96EF9 292 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 TPD52L3Q96J77 140 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 NSMCE2Q96MF7 247 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 TTYH2Q9BSA4 534 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 CLCF1Q9UBD9 225 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 CD300AQ9UGN4 299 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 TMED7Q9Y3B3 224 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 HDGFL3Q9Y3E1 203 aa10.95□□□□□ -0.66
SF3B3-208ENST00000567250 DOCK7Q96N67 2140 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 A0A0B4J2E0 115 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 A0A1B0GX12 115 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 HSPB2A8KAH6 182 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 TNFSF11O14788 317 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 DNPH1O43598 174 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 SERPINA1P01009 418 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 IFNW1P05000 195 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 IL11P20809 199 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 AGAP20933 346 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 HTR2AP28223 471 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 SUCLG1P53597 346 aaKnown RBP10.94□□□□□ -0.66
SF3B3-208ENST00000567250 NUP107P57740 925 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 BNIP1Q12981 228 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 PON3Q15166 354 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 HSPB2Q16082 182 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 CTU2Q2VPK5 515 aaKnown RBP10.94□□□□□ -0.66
SF3B3-208ENST00000567250 TMEM176BQ3YBM2 270 aaPredicted RBP10.94□□□□□ -0.66
SF3B3-208ENST00000567250 IFI44LQ53G44 452 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 MTX3Q5HYI7 312 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 RTL6Q6ICC9 239 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 PPP4R4Q6NUP7 873 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 C6orf89Q6UWU4 347 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 FKBP9P1Q75LS8 142 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 ADGRE4PQ86SQ3 457 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 COMTD1Q86VU5 262 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 CARM1Q86X55 608 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 ZNF808Q8N4W9 903 aaPredicted RBP10.94□□□□□ -0.66
SF3B3-208ENST00000567250 FAM156AQ8NDB6 213 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 OR6T1Q8NGN1 323 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 POP5Q969H6 163 aaKnown RBP10.94□□□□□ -0.66
SF3B3-208ENST00000567250 SLC47A1Q96FL8 570 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 HSH2DQ96JZ2 352 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 ADGRG7Q96K78 797 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 OR5B2Q96R09 309 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 MCHR1Q99705 422 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 BTBD10Q9BSF8 475 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 PRRG4Q9BZD6 226 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 ADAM19Q9H013 955 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 PCDHAC1Q9H158 963 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 GORASP2Q9H8Y8 452 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 TAS2R1Q9NYW7 299 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 MPDZO75970 2070 aa10.94□□□□□ -0.66
SF3B3-208ENST00000567250 RELNP78509 3460 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 A0A0J9YW62 118 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 A0A1B0GWA3 101 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 TMEM72A0PK05 275 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 CLEC18AA5D8T8 446 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 CPSF4LA6NMK7 179 aaKnown RBP10.93□□□□□ -0.66
SF3B3-208ENST00000567250 A8MVM7 634 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 ARPC2O15144 300 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 CHP2O43745 196 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 CXCL13O43927 109 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 SEMA7AO75326 666 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 AHSA1O95433 338 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 PMS2P2O95744 297 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 LDLRP01130 860 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 GLI4P10075 376 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 HOXB1P14653 301 aaPredicted RBP10.93□□□□□ -0.66
SF3B3-208ENST00000567250 NCK1P16333 377 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 CHRNB4P30926 498 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 CARD18P57730 90 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 RAC3P60763 192 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 CBX1P83916 185 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 HOXC5Q00444 222 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 CEACAM7Q14002 265 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 OR1Q1Q15612 314 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 ZNF239Q16600 458 aaKnown RBP10.93□□□□□ -0.66
SF3B3-208ENST00000567250 ENTPD8Q5MY95 495 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 XKRXQ6PP77 449 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 CLEC18BQ6UXF7 455 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 DEF8Q6ZN54 512 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 ATG4DQ86TL0 474 aaPredicted RBP10.93□□□□□ -0.66
SF3B3-208ENST00000567250 ADGRG3Q86Y34 549 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 RPRMLQ8N4K4 120 aa10.93□□□□□ -0.66
SF3B3-208ENST00000567250 MARVELD2Q8N4S9 558 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms