RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 GLYATQ6IB77 296 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 PLXDC2Q6UX71 529 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 TRIM69Q86WT6 500 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 TMEM25Q86YD3 366 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 CLEC4FQ8N1N0 589 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 STK40Q8N2I9 435 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 ZCCHC7Q8N3Z6 543 aaKnown RBP3.79□□□□□ -1.8
LINC00561-201ENST00000565815 C1orf52Q8N6N3 182 aaKnown RBP3.79□□□□□ -1.8
LINC00561-201ENST00000565815 TMCO5AQ8N6Q1 288 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 OR13J1Q8NGT2 312 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 BRSK1Q8TDC3 778 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 SORCS1Q8WY21 1168 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 TAMM41Q96BW9 452 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 PDLIM5Q96HC4 596 aaKnown RBP3.79□□□□□ -1.8
LINC00561-201ENST00000565815 NODALQ96S42 347 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 APOL2Q9BQE5 337 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 SLC39A8Q9C0K1 460 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 RSPH9Q9H1X1 276 aaPredicted RBP3.79□□□□□ -1.8
LINC00561-201ENST00000565815 C6orf106Q9H6K1 298 aaPredicted RBP3.79□□□□□ -1.8
LINC00561-201ENST00000565815 LIN28AQ9H9Z2 209 aaKnown RBP3.79□□□□□ -1.8
LINC00561-201ENST00000565815 TMEM30AQ9NV96 361 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 SCN3BQ9NY72 215 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 AKAP7Q9P0M2 348 aaPredicted RBP3.79□□□□□ -1.8
LINC00561-201ENST00000565815 DAPK2Q9UIK4 370 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 BTRCQ9Y297 605 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 CACNA1EQ15878 2313 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 IGLV3-10A0A075B6K4 115 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 SYNJ2BP-COX16A0A087WUM0 186 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 ANKUB1A6NFN9 424 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 G3V2T6 193 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 PRAMEF26H0Y7S4 382 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 TRIM77I1YAP6 450 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 SLC28A1O00337 649 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 VPS26AO75436 327 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 SNX4O95219 450 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 IL6P05231 212 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 GNAO1P09471 354 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 THBS3P49746 956 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 ARHGDIAP52565 204 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 STC1P52823 247 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 PLA2G16P53816 162 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 PITX1P78337 314 aaPredicted RBP3.79□□□□□ -1.8
LINC00561-201ENST00000565815 ZNF33BQ06732 778 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 ABRQ12979 859 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 ZNF234Q14588 700 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 NEDD8Q15843 81 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 INAQ16352 499 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 CDKL4Q5MAI5 379 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 SYT6Q5T7P8 510 aaPredicted RBP3.79□□□□□ -1.8
LINC00561-201ENST00000565815 ATAD3BQ5T9A4 648 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 ZNF691Q5VV52 312 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 FAM46CQ5VWP2 391 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 GPRIN3Q6ZVF9 776 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 BBS7Q8IWZ6 715 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 CHDHQ8NE62 594 aaPredicted RBP3.79□□□□□ -1.8
LINC00561-201ENST00000565815 OR7A2PQ8NGA2 310 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 PHF21BQ96EK2 531 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 OR6C1Q96RD1 312 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 APOL4Q9BPW4 351 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 MMP27Q9H306 513 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 TMEM245Q9H330 911 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 Q9N2K0 584 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 FAM118AQ9NWS6 357 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 COX16Q9P0S2 106 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 SCML2Q9UQR0 700 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 C1orf232A0A0U1RR37 186 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 PNMA8CA0A1B0GUJ8 204 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 SUPT3HB4E1H0 165 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 BOLA2-SMG1P6H3BVE0 249 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 M0R3G1 203 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 UPK1AO00322 258 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 MAGEB3O15480 346 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 NDUFS4O43181 175 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 AQP9O43315 295 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 BCAS1O75363 584 aaPredicted RBP3.79□□□□□ -1.8
LINC00561-201ENST00000565815 SNAP29O95721 258 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 PTTG1O95997 202 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 CD1EP15812 388 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 SERPINB1P30740 379 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 TLX1P31314 330 aaPredicted RBP3.79□□□□□ -1.8
LINC00561-201ENST00000565815 TTPAP49638 278 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 CDKN2DP55273 166 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 ZNF45Q02386 682 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 FHL1Q13642 323 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 SELPLGQ14242 412 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 C1QTNF12Q5T7M4 302 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 MLIPQ5VWP3 458 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 CLEC6AQ6EIG7 209 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 ERICH5Q6P6B1 374 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 PLEKHG7Q6ZR37 379 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 ADAMTSL2Q86TH1 951 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 RNF113BQ8IZP6 322 aaKnown RBP3.79□□□□□ -1.8
LINC00561-201ENST00000565815 OR6Q1Q8NGQ2 317 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 OR9I1Q8NGQ6 314 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 OR4L1Q8NH43 312 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 SSC4DQ8WTU2 575 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 ANKRD49Q8WVL7 239 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 FIG4Q92562 907 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 RORBQ92753 470 aa3.79□□□□□ -1.8
LINC00561-201ENST00000565815 TMBIM1Q969X1 311 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms