RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 HDGFL3Q9Y3E1 203 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 GPR45Q9Y5Y3 372 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 FBN2P35556 2912 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 KIAA1549Q9HCM3 1950 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 TMED7-TICAM2A0A0A6YYA0 188 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 A0A1W2PR80 420 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 PRAMEF27A3QJZ7 478 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 TMEM247A6NEH6 219 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 CFAP73A6NFT4 308 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 AGAP5A6NIR3 686 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 OR5H1A6NKK0 313 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 M0R1B8 84 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 ETV2O00321 342 aaPredicted RBP5.67□□□□□ -1.5
TCF4-228ENST00000565393 SDHDO14521 159 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 AP3D1O14617 1153 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 KIAA0513O60268 411 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 ZNF500O60304 480 aaPredicted RBP5.67□□□□□ -1.5
TCF4-228ENST00000565393 EIF1BO60739 113 aaKnown RBP5.67□□□□□ -1.5
TCF4-228ENST00000565393 TMCC2O75069 709 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 RAD51DO75771 328 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 KRT33AO76009 404 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 PMS2P2O95744 297 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 DBIP07108 87 aaKnown RBP5.67□□□□□ -1.5
TCF4-228ENST00000565393 ALDOCP09972 364 aaKnown RBP5.67□□□□□ -1.5
TCF4-228ENST00000565393 IDO1P14902 403 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 CDH2P19022 906 aaPredicted RBP5.67□□□□□ -1.5
TCF4-228ENST00000565393 NCF2P19878 526 aaPredicted RBP5.67□□□□□ -1.5
TCF4-228ENST00000565393 CXCR1P25024 350 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 EDNRAP25101 427 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 IL12AP29459 219 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 CDKN1AP38936 164 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 CDKN2CP42773 168 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 POLR2HP52434 150 aaKnown RBP5.67□□□□□ -1.5
TCF4-228ENST00000565393 MAGOHP61326 146 aaKnown RBP5.67□□□□□ -1.5
TCF4-228ENST00000565393 COPZ1P61923 177 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 SLC35A1P78382 337 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 TXNL4AP83876 142 aaKnown RBP5.67□□□□□ -1.5
TCF4-228ENST00000565393 TNK1Q13470 666 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 PDK3Q15120 406 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 GSTA3Q16772 222 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 CLEC12BQ2HXU8 276 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 COX20Q5RI15 118 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 TIMM23BQ5SRD1 257 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 C9orf135Q5VTT2 229 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 AP1ARQ63HQ0 302 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 TMEM225Q6GV28 225 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 OGFOD2Q6N063 350 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 ADAM5Q6NVV9 412 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 SLC22A25Q6T423 547 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 KLHL17Q6TDP4 642 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 FRRS1Q6ZNA5 592 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 LRRC74BQ6ZQY2 392 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 ATG4DQ86TL0 474 aaPredicted RBP5.67□□□□□ -1.5
TCF4-228ENST00000565393 CMIPQ8IY22 773 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 CADM2Q8N3J6 435 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 ZNF433Q8N7K0 673 aaPredicted RBP5.67□□□□□ -1.5
TCF4-228ENST00000565393 GLB1L3Q8NCI6 653 aaPredicted RBP5.67□□□□□ -1.5
TCF4-228ENST00000565393 OR52N5Q8NH56 324 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 OR52P1PQ8NH57 321 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 PIGXQ8TBF5 258 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 WDR60Q8WVS4 1066 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 OIT3Q8WWZ8 545 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 POTEKPQ9BYX7 375 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 ARMC7Q9H6L4 198 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 RMND5AQ9H871 391 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 EXOSC3Q9NQT5 275 aaKnown RBP5.67□□□□□ -1.5
TCF4-228ENST00000565393 ZNF701Q9NV72 531 aaPredicted RBP5.67□□□□□ -1.5
TCF4-228ENST00000565393 AIG1Q9NVV5 245 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 RLIMQ9NVW2 624 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 HAO1Q9UJM8 370 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 OSGIN1Q9UJX0 560 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 RAB21Q9UL25 225 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 TRAPPC4Q9Y296 219 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 TMED7Q9Y3B3 224 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 PKDREJQ9NTG1 2253 aa5.67□□□□□ -1.5
TCF4-228ENST00000565393 IGKV3D-15A0A087WSY6 115 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 TMEM72A0PK05 275 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 ZNF716A6NP11 495 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 RNF223E7ERA6 249 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 ABCD4O14678 606 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 UBDO15205 165 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 ZNF208O43345 1280 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 ERLIN1O75477 346 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 PGM3O95394 542 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 TP53P04637 393 aaPredicted RBP5.66□□□□□ -1.5
TCF4-228ENST00000565393 BCHEP06276 602 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 CHRM4P08173 479 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 SOD3P08294 240 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 GKN3PP0CG01 181 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 IMPDH2P12268 514 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 ETFAP13804 333 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 PAX1P15863 534 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 NTF4P34130 210 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 ACVR1BP36896 505 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 SLC1A3P43003 542 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 POLR2JP52435 117 aaKnown RBP5.66□□□□□ -1.5
TCF4-228ENST00000565393 MAP2K6P52564 334 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 WDR4P57081 412 aaKnown RBP5.66□□□□□ -1.5
TCF4-228ENST00000565393 FUT5Q11128 374 aa5.66□□□□□ -1.5
TCF4-228ENST00000565393 CEACAM7Q14002 265 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms