RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 CALCBP10092 127 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 FGF9P31371 208 aaPredicted RBP2.52□□□□□ -2.01
PALB2-203ENST00000565038 SH3BGRP55822 239 aaPredicted RBP2.52□□□□□ -2.01
PALB2-203ENST00000565038 RAP1BP61224 184 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 PAX5Q02548 391 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 INAQ16352 499 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 NRF1Q16656 503 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 KLF17Q5JT82 389 aaPredicted RBP2.52□□□□□ -2.01
PALB2-203ENST00000565038 ZFP2Q6ZN57 461 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 ACOT1Q86TX2 421 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 RALGPS2Q86X27 583 aaPredicted RBP2.52□□□□□ -2.01
PALB2-203ENST00000565038 GRAMD2AQ8IUY3 354 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 MFSD6LQ8IWD5 586 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 C6orf223Q8N319 242 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 TMEM158Q8WZ71 300 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 ST8SIA1Q92185 356 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 C4orf36Q96KX1 117 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 OR2M2Q96R28 347 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 NRIP2Q9BQI9 281 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 ACTR3BQ9P1U1 418 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 V9GY05 133 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 BICRAQ9NZM4 1560 aa2.52□□□□□ -2.01
PALB2-203ENST00000565038 A0A1B0GUS0 222 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 KRTAP4-16G5E9R7 235 aaPredicted RBP2.51□□□□□ -2.01
PALB2-203ENST00000565038 TM7SF2O76062 418 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 DIRAS3O95661 229 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 AK1P00568 194 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 PCCBP05166 539 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 RPS2P15880 293 aaKnown RBP2.51□□□□□ -2.01
PALB2-203ENST00000565038 ANXA13P27216 316 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 SUCLG1P53597 346 aaKnown RBP2.51□□□□□ -2.01
PALB2-203ENST00000565038 AP3M2P53677 418 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 TAS2R19P59542 299 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 PJVKQ0ZLH3 352 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 SCGB2A2Q13296 93 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 MADCAM1Q13477 382 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 CCDC57Q2TAC2 916 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 GGTA1PQ4G0N0 100 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 TMEM41BQ5BJD5 291 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 GPRC6AQ5T6X5 926 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 CENPLQ8N0S6 344 aaPredicted RBP2.51□□□□□ -2.01
PALB2-203ENST00000565038 OR51G1Q8NGK1 321 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 BRSK1Q8TDC3 778 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 SMYD3Q9H7B4 428 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 AATFQ9NY61 560 aaKnown RBP eCLIP2.51□□□□□ -2.01
PALB2-203ENST00000565038 SIGLEC8Q9NYZ4 499 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 C6orf203Q9P0P8 240 aaPredicted RBP2.51□□□□□ -2.01
PALB2-203ENST00000565038 PHF11Q9UIL8 331 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 CECR2Q9BXF3 1484 aa2.51□□□□□ -2.01
PALB2-203ENST00000565038 RLFQ13129 1914 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 ASTN1O14525 1302 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 NACADO15069 1562 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 A0A0G2JLM5 398 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 PES1O00541 588 aaKnown RBP2.5□□□□□ -2.01
PALB2-203ENST00000565038 RIPK2O43353 540 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 UFL1O94874 794 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 LRATO95237 230 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 TRIM16O95361 564 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 SLC25A27O95847 323 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 CHTF8P0CG12 524 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 ZNF44P15621 663 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 NT5EP21589 574 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 ACADVLP49748 655 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 DAP3P51398 398 aaKnown RBP2.5□□□□□ -2.01
PALB2-203ENST00000565038 PFN3P60673 137 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 ZNF763Q0D2J5 394 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 TP53I3Q53FA7 332 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 C1orf100Q5SVJ3 147 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 TSPO2Q5TGU0 170 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 KCNIP4Q6PIL6 250 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 BLOC1S2Q6QNY1 142 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 C6orf89Q6UWU4 347 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 COX15Q7KZN9 410 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 ZNF540Q8NDQ6 660 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 STXBP6Q8NFX7 210 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 OR51S1Q8NGJ8 323 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 FANK1Q8TC84 345 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 MRPS31Q92665 395 aaKnown RBP2.5□□□□□ -2.01
PALB2-203ENST00000565038 ARPC1AQ92747 370 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 FGF11Q92914 225 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 CCNL2Q96S94 520 aaPredicted RBP2.5□□□□□ -2.01
PALB2-203ENST00000565038 HIST1H4GQ99525 98 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 SLC35A5Q9BS91 424 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 HDHD3Q9BSH5 251 aaPredicted RBP2.5□□□□□ -2.01
PALB2-203ENST00000565038 NAT9Q9BTE0 207 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 ZNF416Q9BWM5 594 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 SLC17A9Q9BYT1 436 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 TMEM117Q9H0C3 514 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 DPH5Q9H2P9 285 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 TRAF3IP3Q9Y228 551 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 U3KQV3 271 aa2.5□□□□□ -2.01
PALB2-203ENST00000565038 ATP8B3O60423 1300 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 MAP3K15Q6ZN16 1313 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 IGLV4-69A0A075B6H9 119 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.49□□□□□ -2.01
PALB2-203ENST00000565038 IGKV6-21A0A0C4DH24 114 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 E9PBE3 544 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 DCTN6O00399 190 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 ZSCAN12O43309 604 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms