RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SNX33Q8WV41 574 aa18.95■□□□□ 0.62
MAP1LC3B-206ENST00000564844 PPP1R16AQ96I34 528 aa18.95■□□□□ 0.62
MAP1LC3B-206ENST00000564844 TNFRSF13CQ96RJ3 184 aa18.95■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ADGRL4Q9HBW9 690 aa18.95■□□□□ 0.62
MAP1LC3B-206ENST00000564844 PFDN2Q9UHV9 154 aa18.95■□□□□ 0.62
MAP1LC3B-206ENST00000564844 FAM86C2PA6NEL3 165 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 DNAJB6O75190 326 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ERVK-21P61565 698 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 BTN3A2P78410 334 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 KCNAB1Q14722 419 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 HLXQ14774 488 aaPredicted RBP18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 OR7G2Q8NG99 324 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 OR52E2Q8NGJ4 325 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 OR4C6Q8NH72 309 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ARRDC3Q96B67 414 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 TMEM138Q9NPI0 162 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 CLDND1Q9NY35 253 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 COPZ2Q9P299 210 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ZNF443Q9Y2A4 671 aaPredicted RBP18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 CEP290O15078 2479 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ZNF860A6NHJ4 632 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 MCRIP1C9JLW8 97 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 PAPLNO95428 1278 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 HTR2AP28223 471 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 RPL35P42766 123 aaKnown RBP18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 TPMTP51580 245 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 RGS7BPQ6MZT1 257 aaPredicted RBP18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ZNF454Q8N9F8 522 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 FAM98AQ8NCA5 519 aaKnown RBP18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ZDHHC1Q8WTX9 485 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 SMIM4Q8WVI0 70 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 BHLHE40O14503 412 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 HIST1H1TP22492 207 aaPredicted RBP18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 C11orf88Q6PI97 169 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 FRRS1Q6ZNA5 592 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 SHARPINQ9H0F6 387 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 IFT46Q9NQC8 304 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 CAMK2AQ9UQM7 478 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 STON1Q9Y6Q2 735 aa18.94■□□□□ 0.62
MAP1LC3B-206ENST00000564844 EMC8O43402 210 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 SUSD5O60279 629 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 BMP8BP34820 402 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 MPIP34949 423 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ANXA11P50995 505 aaKnown RBP18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 PLA2G7Q13093 441 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 BEX5Q5H9J7 111 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ELP2Q6IA86 826 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 BMP8AQ7Z5Y6 402 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 HDDC3Q8N4P3 179 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 OR6K6Q8NGW6 343 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ZCCHC10Q8TBK6 192 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 TMEM239Q8WW34 195 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 DNAJA3Q96EY1 480 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 PTCHD1Q96NR3 888 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 TSPAN10Q9H1Z9 355 aaPredicted RBP18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 REV3LO60673 3130 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 COL4A3Q01955 1670 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 PLSCR5A0PG75 271 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 F3P13726 295 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 MAT2AP31153 395 aaKnown RBP18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 AKR1C2P52895 323 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 AKR1C1Q04828 323 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 STX4Q12846 297 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 TPRA1Q86W33 373 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 CRIPAKQ8N1N5 446 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 BPIFA2Q96DR5 249 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 PELI1Q96FA3 418 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 PRSS27Q9BQR3 290 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 CD93Q9NPY3 652 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 TAS2R10Q9NYW0 307 aa18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ASCC3Q8N3C0 2202 aaKnown RBP18.93■□□□□ 0.62
MAP1LC3B-206ENST00000564844 RIIAD1A6NNX1 92 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 KLF4O43474 513 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ZNF35P13682 527 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 CST5P28325 142 aaPredicted RBP18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 REEP5Q00765 189 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 DUSP5Q16690 384 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 HSD17B12Q53GQ0 312 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 OR8S1Q8NH09 359 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ZNRF4Q8WWF5 429 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 WNT2BQ93097 391 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 PTTG3PQ9NZH4 202 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 FAM74A7A6NL05 159 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 PYCARD-AS1I3L0S3 204 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 STX11O75558 287 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 OR1Q1Q15612 314 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 FAM74A3Q4VXF1 159 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 PXKQ7Z7A4 578 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 C12orf40Q86WS4 652 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ZNF780BQ9Y6R6 833 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ATP1B1P05026 303 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ST8SIA6P61647 398 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 TRMT12Q53H54 448 aaKnown RBP18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 DCAF12L2Q5VW00 463 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 OR56A1Q8NGH5 318 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 OR5K2Q8NHB8 316 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 SYNPRQ8TBG9 265 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 MNTQ99583 582 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 FAM83CQ9BQN1 747 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 CACYBPQ9HB71 228 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms