RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 TXNL1O43396 289 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 MBTPS2O43462 519 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 KLRC4O43908 158 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 CYTIPO60759 359 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 ZNF354AO60765 605 aaPredicted RBP3.2□□□□□ -1.9
CHD9-212ENST00000564641 CDH16O75309 829 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 NME6O75414 186 aaPredicted RBP3.2□□□□□ -1.9
CHD9-212ENST00000564641 TTC4O95801 387 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 MCF2P10911 925 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 CD59P13987 128 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 IL9P15248 144 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 CTRB1P17538 263 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 PSMC3P17980 439 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 AHCYP23526 432 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 ANXA13P27216 316 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 PRDX6P30041 224 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 SFNP31947 248 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 COILP38432 576 aaPredicted RBP3.2□□□□□ -1.9
CHD9-212ENST00000564641 BLVRAP53004 296 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 CRYBB1P53674 252 aaPredicted RBP3.2□□□□□ -1.9
CHD9-212ENST00000564641 ATXN3P54252 364 aaPredicted RBP3.2□□□□□ -1.9
CHD9-212ENST00000564641 HTD2P86397 168 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 MYBPC1Q00872 1141 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 APOFQ13790 326 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 EXOC3L4Q17RC7 722 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 CCDC58Q4VC31 144 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 IFI44LQ53G44 452 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 RABGAP1LQ5R372 815 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 ATP1A1-AS1Q5TC04 95 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 OGFRL1Q5TC84 451 aaPredicted RBP3.2□□□□□ -1.9
CHD9-212ENST00000564641 SEL1L2Q5TEA6 688 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 CTRB2Q6GPI1 263 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 NANOGP8Q6NSW7 305 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 PPP1R2P3Q6NXS1 205 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 CCDC137Q6PK04 289 aaKnown RBP3.2□□□□□ -1.9
CHD9-212ENST00000564641 ABRAXAS1Q6UWZ7 409 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 NT5DC3Q86UY8 548 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 TBC1D10CQ8IV04 446 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 CCDC60Q8IWA6 550 aaPredicted RBP3.2□□□□□ -1.9
CHD9-212ENST00000564641 ELMOD2Q8IZ81 293 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 SLC38A6Q8IZM9 456 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 SLC34A3Q8N130 599 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 PARP8Q8N3A8 854 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 ARL6IP6Q8N6S5 226 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 UBL4BQ8N7F7 174 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 URGCPQ8TCY9 931 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 RNASE8Q8TDE3 154 aaKnown RBP3.2□□□□□ -1.9
CHD9-212ENST00000564641 ST7LQ8TDW4 575 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 ANKRD49Q8WVL7 239 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 DNAJB3Q8WWF6 145 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 PYDC1Q8WXC3 89 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 CDKL2Q92772 493 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 PEX13Q92968 403 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 TMIGD2Q96BF3 282 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 PYCR2Q96C36 320 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 DCUN1D1Q96GG9 259 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 TSGA13Q96PP4 275 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 KCNK16Q96T55 309 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 CIB1Q99828 191 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 C1orf50Q9BV19 199 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 CALN1Q9BXU9 219 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 TMEM117Q9H0C3 514 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 SLITRK2Q9H156 845 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 SDCBP2Q9H190 292 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 EGLN3Q9H6Z9 239 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 SLCO1B3Q9NPD5 702 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 ZNF302Q9NR11 478 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 ANAPC11Q9NYG5 84 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 NINJ2Q9NZG7 142 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 SENP1Q9P0U3 644 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 IL36AQ9UHA7 158 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 PCYOX1Q9UHG3 505 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 NOCTQ9UK39 431 aaKnown RBP3.2□□□□□ -1.9
CHD9-212ENST00000564641 GMEB2Q9UKD1 530 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 VANGL2Q9ULK5 521 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 GINS2Q9Y248 185 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 AP4B1Q9Y6B7 739 aa3.2□□□□□ -1.9
CHD9-212ENST00000564641 C1orf232A0A0U1RR37 186 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 GOLGA8JA6NMD2 632 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 EVPLLA8MZ36 301 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 C17orf105B2RV13 164 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 H7C0C1 242 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 POLR1CO15160 346 aaPredicted RBP3.19□□□□□ -1.9
CHD9-212ENST00000564641 SLC22A1O15245 554 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 SPAG6O75602 509 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 TRIM16O95361 564 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 PLEKHA8P1O95397 391 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 KRT8P05787 483 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 CAPN1P07384 714 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 GFAPP14136 432 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 CCNA2P20248 432 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 CXCR2P25025 360 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 CTNNA2P26232 953 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 CD52P31358 61 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 RPA3P35244 121 aaPredicted RBP3.19□□□□□ -1.9
CHD9-212ENST00000564641 DRD3P35462 400 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 OR3A3P47888 321 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 ERFP50548 548 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 ATP4BP51164 291 aa3.19□□□□□ -1.9
CHD9-212ENST00000564641 DSTNP60981 165 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms