RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 EPYCQ99645 322 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 RBM4BQ9BQ04 359 aaKnown RBP16.3■□□□□ 0.2
GDE1-203ENST00000564172 RBM4Q9BWF3 364 aaKnown RBP16.3■□□□□ 0.2
GDE1-203ENST00000564172 SLC19A3Q9BZV2 496 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 SHARPINQ9H0F6 387 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 SLC26A1Q9H2B4 701 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 LDAHQ9H6V9 325 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 NUFIP1Q9UHK0 495 aaKnown RBP16.3■□□□□ 0.2
GDE1-203ENST00000564172 TBC1D24Q9ULP9 559 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 LYVE1Q9Y5Y7 322 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 FKBP7Q9Y680 259 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 KIF26BQ2KJY2 2108 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 SYNDIG1LA6NDD5 238 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 M0R3H8 397 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 SYT5O00445 386 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 MRPS14O60783 128 aaKnown RBP16.29■□□□□ 0.2
GDE1-203ENST00000564172 HEXBP07686 556 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 AGXTP21549 392 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 TRHRP34981 398 aaPredicted RBP16.29■□□□□ 0.2
GDE1-203ENST00000564172 CLDN6P56747 220 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 GRK1Q15835 563 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 LAMTOR1Q6IAA8 161 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 PIAS4Q8N2W9 510 aaPredicted RBP16.29■□□□□ 0.2
GDE1-203ENST00000564172 OR14A16Q8NHC5 309 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 DCLRE1CQ96SD1 692 aaKnown RBP16.29■□□□□ 0.2
GDE1-203ENST00000564172 ITPAQ9BY32 194 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 STRADBQ9C0K7 418 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 DCSTAMPQ9H295 470 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 Q9N2J8 555 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 USE1Q9NZ43 259 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 CYB5R1Q9UHQ9 305 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 SLC9A8Q9Y2E8 581 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 CCDC182A6NF36 153 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 TNFRSF11BO00300 401 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 FFAR1O14842 300 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 SSX4O60224 188 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 KIAA0513O60268 411 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 HPRP00739 348 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 IL7RP16871 459 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 SPIBQ01892 262 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 MVKQ03426 396 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 BTN1A1Q13410 526 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 GANABQ14697 944 aaKnown RBP16.29■□□□□ 0.2
GDE1-203ENST00000564172 ISXQ2M1V0 245 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 CLLU1Q5K131 121 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 MRPL14Q6P1L8 145 aaKnown RBP16.29■□□□□ 0.2
GDE1-203ENST00000564172 ZAR1Q86SH2 424 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 MYDGFQ969H8 173 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 LRFN5Q96NI6 719 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 SLC46A1Q96NT5 459 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 MNTQ99583 582 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 SPSB2Q99619 263 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 ULBP3Q9BZM4 244 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 TRIM45Q9H8W5 580 aaPredicted RBP16.29■□□□□ 0.2
GDE1-203ENST00000564172 POLE3Q9NRF9 147 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 ACER3Q9NUN7 267 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 COA4Q9NYJ1 87 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 PDP1Q9P0J1 537 aaPredicted RBP16.29■□□□□ 0.2
GDE1-203ENST00000564172 SLC23A1Q9UHI7 598 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 KCNE5Q9UJ90 142 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 GPR55Q9Y2T6 319 aaPredicted RBP16.29■□□□□ 0.2
GDE1-203ENST00000564172 LOXL2Q9Y4K0 774 aa16.29■□□□□ 0.2
GDE1-203ENST00000564172 CENPVL1A0A0U1RR11 272 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 KLK3P07288 261 aaPredicted RBP16.28■□□□□ 0.2
GDE1-203ENST00000564172 ZP3P21754 424 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 CDH12P55289 794 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 RPP38P78345 283 aaKnown RBP16.28■□□□□ 0.2
GDE1-203ENST00000564172 MAPK14Q16539 360 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 CDCP2Q5VXM1 449 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 DEF8Q6ZN54 512 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 COMMD7Q86VX2 200 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 ZSCAN1Q8NBB4 408 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 OR6T1Q8NGN1 323 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 OR52J3Q8NH60 311 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 ART5Q96L15 291 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 GAL3ST1Q99999 423 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 CDADC1Q9BWV3 514 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 GABARAPL1Q9H0R8 117 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 RLIMQ9NVW2 624 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 KCND3Q9UK17 655 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 ZNF443Q9Y2A4 671 aaPredicted RBP16.28■□□□□ 0.2
GDE1-203ENST00000564172 PCDHGA1Q9Y5H4 931 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 B3GALT1Q9Y5Z6 326 aa16.28■□□□□ 0.2
GDE1-203ENST00000564172 WDFY3Q8IZQ1 3526 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 NPIPA5A0A0B4J1W7 369 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 PQLC2LA1A4F0 135 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 NPIPA7E9PJI5 369 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 ABCD4O14678 606 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 AKR7A2O43488 359 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 ALOX12BO75342 701 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 IGKV1D-16P01601 117 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 NPIPA8P0DM63 369 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 RRASP10301 218 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 RPS4Y1P22090 263 aaKnown RBP16.27■□□□□ 0.2
GDE1-203ENST00000564172 PIGAP37287 484 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 ETV5P41161 510 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 RFX3P48380 749 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 HMGA2P52926 109 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 EMP2P54851 167 aa16.27■□□□□ 0.2
GDE1-203ENST00000564172 PER3P56645 1201 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms