RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 SMAP2Q8WU79 429 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 SFT2D1Q8WV19 159 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 TM9SF4Q92544 642 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 LRRC46Q96FV0 321 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 PGLYRP2Q96PD5 576 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 PCYT2Q99447 389 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 MTERF1Q99551 399 aaKnown RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 PKMYT1Q99640 499 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 SEPT5Q99719 369 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 TSSK6Q9BXA6 273 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 MS4A7Q9GZW8 240 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 TWSG1Q9GZX9 223 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 TKTL2Q9H0I9 626 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 OPA3Q9H6K4 179 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 SEBOXQ9HB31 216 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 DNAJC11Q9NVH1 559 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 SPHK1Q9NYA1 384 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 NDUFAF4Q9P032 175 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 STOX2Q9P2F5 926 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 ZNF624Q9P2J8 865 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 GALPQ9UBC7 116 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 AFF4Q9UHB7 1163 aaKnown RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 ZNF580Q9UK33 172 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 CCNL1Q9UK58 526 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 CA5BQ9Y2D0 317 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 CARHSP1Q9Y2V2 147 aaKnown RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 OARD1Q9Y530 152 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 UBR3Q6ZT12 1888 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 TRIP11Q15643 1979 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 KIAA1217Q5T5P2 1943 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 A0A1W2PRB8 838 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 OR2M5A3KFT3 312 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 GSAPA4D1B5 854 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 ZNF729A6NN14 1252 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 AGAP14A8MT82 685 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 C5orf58C9J3I9 102 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 LRRN3E7EW58 273 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 G3V3Q6 166 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 FAM72CH0Y354 149 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 H7C0S8 307 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 PIRO00625 290 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 UBE2CO00762 179 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 SSNA1O43805 119 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 GALR3O60755 368 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 HPGDSO60760 199 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 NDUFS3O75489 264 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 ATG12O94817 140 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 MT-CYBP00156 380 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 CFDP00746 253 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 HIST1H2ABP04908 130 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 FHP07954 510 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 ACP2P11117 423 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 EN2P19622 333 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 GSTM3P21266 225 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 ADORA2BP29275 332 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 PRDX3P30048 256 aaKnown RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 HOXA6P31267 233 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 PBX3P40426 434 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 SOX3P41225 446 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 RPL35P42766 123 aaKnown RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 PTGER3P43115 390 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 RGS4P49798 205 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 HTR6P50406 440 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 ARHGDIBP52566 201 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 PGGT1BP53609 377 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 CRISP3P54108 245 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 SPIBQ01892 262 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 SREBF2Q12772 1141 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 PPP1R8Q12972 351 aaKnown RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 GPR17Q13304 367 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 PIN1Q13526 163 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 EIF4EBP2Q13542 120 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 RBMS2Q15434 407 aaKnown RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 TAF12Q16514 161 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 ZNF630Q2M218 657 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 EXOC3L2Q2M3D2 409 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 FAM72AQ5TYM5 149 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 C22orf42Q6IC83 251 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 OR7E24Q6IFN5 339 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 ZNF770Q6IQ21 691 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 FAM72DQ6L9T8 149 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 MSANTD2Q6P1R3 559 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 HAGHLQ6PII5 290 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 GSG1LQ6UXU4 331 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 HIST3H2AQ7L7L0 130 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 LRRC70Q7Z2Q7 622 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 FAM72BQ86X60 149 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 TOMM5Q8N4H5 51 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 ARIH2OSQ8N7S6 290 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 DBF4BQ8NFT6 615 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 OR52P1PQ8NH57 321 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 OR1S1Q8NH92 325 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 GOT1L1Q8NHS2 421 aaPredicted RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 SLC7A13Q8TCU3 470 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 GLYATL2Q8WU03 294 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 HIST1H2ACQ93077 130 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 RBM14Q96PK6 669 aaKnown RBP3.24□□□□□ -1.89
LINC01416-201ENST00000563553 BTBD1Q9H0C5 482 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 LRRN3Q9H3W5 708 aa3.24□□□□□ -1.89
LINC01416-201ENST00000563553 C11orf49Q9H6J7 331 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms