RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 MRPL33O75394 65 aaKnown RBP16.39■□□□□ 0.21
NME3-204ENST00000563498 GUSBP08236 651 aa16.39■□□□□ 0.21
NME3-204ENST00000563498 UBTFL6P0CB48 400 aaPredicted RBP16.39■□□□□ 0.21
NME3-204ENST00000563498 TFPIP10646 304 aa16.39■□□□□ 0.21
NME3-204ENST00000563498 ZNF16P17020 682 aaPredicted RBP16.39■□□□□ 0.21
NME3-204ENST00000563498 CLK1P49759 484 aaKnown RBP16.39■□□□□ 0.21
NME3-204ENST00000563498 HBA1P69905 142 aa16.39■□□□□ 0.21
NME3-204ENST00000563498 ARHGAP11BQ3KRB8 267 aa16.39■□□□□ 0.21
NME3-204ENST00000563498 ATP6AP1LQ52LC2 224 aa16.39■□□□□ 0.21
NME3-204ENST00000563498 C17orf78Q8N4C9 275 aa16.39■□□□□ 0.21
NME3-204ENST00000563498 FAM71CQ8NEG0 241 aa16.39■□□□□ 0.21
NME3-204ENST00000563498 OR5AK3PQ8NH89 298 aa16.39■□□□□ 0.21
NME3-204ENST00000563498 ZNF350Q9GZX5 532 aa16.39■□□□□ 0.21
NME3-204ENST00000563498 SERHL2Q9H4I8 314 aa16.39■□□□□ 0.21
NME3-204ENST00000563498 FKRPQ9H9S5 495 aa16.39■□□□□ 0.21
NME3-204ENST00000563498 GIMAP2Q9UG22 337 aa16.39■□□□□ 0.21
NME3-204ENST00000563498 HDGFL3Q9Y3E1 203 aa16.39■□□□□ 0.21
NME3-204ENST00000563498 PMF1-BGLAPU3KQ54 211 aa16.39■□□□□ 0.21
NME3-204ENST00000563498 CENPVL1A0A0U1RR11 272 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 A0A1W2PR80 420 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 PDLIM1O00151 329 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 SHBGP04278 402 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 ITGA5P08648 1049 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 MATN1P21941 496 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 APOBEC3AP31941 199 aaPredicted RBP16.38■□□□□ 0.21
NME3-204ENST00000563498 NTF4P34130 210 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 PGM1P36871 562 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 GZMKP49863 264 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 RPS26P62854 115 aaKnown RBP16.38■□□□□ 0.21
NME3-204ENST00000563498 LSM11P83369 360 aaKnown RBP eCLIP16.38■□□□□ 0.21
NME3-204ENST00000563498 C6orf136Q5SQH8 315 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 AP1ARQ63HQ0 302 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 C6orf120Q7Z4R8 191 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 C4orf33Q8N1A6 199 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 KRTCAP2Q8N6L1 136 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 C1orf162Q8NEQ5 155 aaPredicted RBP16.38■□□□□ 0.21
NME3-204ENST00000563498 C1orf50Q9BV19 199 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 DUSP26Q9BV47 211 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 DCTN4Q9UJW0 460 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 MKLN1Q9UL63 735 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 SLC35A3Q9Y2D2 325 aa16.38■□□□□ 0.21
NME3-204ENST00000563498 NDUFS8O00217 210 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 SRD5A1P18405 259 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 SOAT1P35610 550 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 MAGEA8P43361 318 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 H3F3AP84243 136 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 IL23RQ5VWK5 629 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 GRINAQ7Z429 371 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 WDR31Q8NA23 367 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 FNDC5Q8NAU1 212 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 MIPOL1Q8TD10 442 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 ARL5BQ96KC2 179 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 C19orf24Q9BVV8 132 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 CTPS2Q9NRF8 586 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 EXD2Q9NVH0 621 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 TRAPPC4Q9Y296 219 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 AMDHD2Q9Y303 409 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 ATP23Q9Y6H3 246 aa16.37■□□□□ 0.21
NME3-204ENST00000563498 NUP214P35658 2090 aaPredicted RBP16.36■□□□□ 0.21
NME3-204ENST00000563498 VWC2LB2RUY7 222 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 KIAA0513O60268 411 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 AGR2O95994 175 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 IGFBP5P24593 272 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 ALDH3A1P30838 453 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 FOXG1P55316 489 aaPredicted RBP16.36■□□□□ 0.21
NME3-204ENST00000563498 PHC1P78364 1004 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 MAPK14Q16539 360 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 FAM166AQ6J272 317 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 C16orf62Q7Z3J2 963 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 ARIH2OSQ8N7S6 290 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 ZNF563Q8TA94 476 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 C3orf30Q96M34 536 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 C1QTNF6Q9BXI9 259 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 SLC17A5Q9NRA2 495 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 POLE3Q9NRF9 147 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 PARPBPQ9NWS1 579 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 MKS1Q9NXB0 559 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 KCNS2Q9ULS6 477 aa16.36■□□□□ 0.21
NME3-204ENST00000563498 RNF103-CHMP3A0A140T963 221 aa16.35■□□□□ 0.21
NME3-204ENST00000563498 SLU7O95391 586 aaKnown RBP16.35■□□□□ 0.21
NME3-204ENST00000563498 PDLIM4P50479 330 aa16.35■□□□□ 0.21
NME3-204ENST00000563498 TGFBR3Q03167 851 aa16.35■□□□□ 0.21
NME3-204ENST00000563498 ADGRG3Q86Y34 549 aa16.35■□□□□ 0.21
NME3-204ENST00000563498 CCDC103Q8IW40 242 aa16.35■□□□□ 0.21
NME3-204ENST00000563498 OR52E4Q8NGH9 312 aa16.35■□□□□ 0.21
NME3-204ENST00000563498 SLC35G5Q96KT7 338 aa16.35■□□□□ 0.21
NME3-204ENST00000563498 SAP130Q9H0E3 1048 aa16.35■□□□□ 0.21
NME3-204ENST00000563498 EXOSC3Q9NQT5 275 aaKnown RBP16.35■□□□□ 0.21
NME3-204ENST00000563498 TMEM181Q9P2C4 612 aa16.35■□□□□ 0.21
NME3-204ENST00000563498 SLC9A8Q9Y2E8 581 aa16.35■□□□□ 0.21
NME3-204ENST00000563498 FKBP7Q9Y680 259 aa16.35■□□□□ 0.21
NME3-204ENST00000563498 ANK2Q01484 3957 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 SMIM23A6NLE4 172 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 EIF1BO60739 113 aaKnown RBP16.34■□□□□ 0.21
NME3-204ENST00000563498 SERPINB5P36952 375 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 HTR3AP46098 478 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 CLDN8P56748 225 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 SWI5Q1ZZU3 235 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 FAM120AOSQ5T036 256 aa16.34■□□□□ 0.21
NME3-204ENST00000563498 ATAD3BQ5T9A4 648 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms