RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 GPR135Q8IZ08 494 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 ZNF738Q8NE65 137 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 CPPED1Q9BRF8 314 aaPredicted RBP5.87□□□□□ -1.47
CLK3-212ENST00000563418 MAGEH1Q9H213 219 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 ACTL8Q9H568 366 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 CWH43Q9H720 699 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 IL21RQ9HBE5 538 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 MBD1Q9UIS9 605 aaPredicted RBP5.87□□□□□ -1.47
CLK3-212ENST00000563418 GAB2Q9UQC2 676 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 ZNF726A6NNF4 738 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 LINC00587B1AMM8 73 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 ERAL1O75616 437 aaKnown RBP5.87□□□□□ -1.47
CLK3-212ENST00000563418 ZNF823P16415 610 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 TBPP20226 339 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 PSMB6P28072 239 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 OR10J1P30954 320 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 CLDN10P78369 228 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 PMPCAQ10713 525 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 CCINQ13939 588 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 CBX2Q14781 532 aaPredicted RBP5.87□□□□□ -1.47
CLK3-212ENST00000563418 KIAA0319Q5VV43 1072 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 DHRS7BQ6IAN0 325 aaPredicted RBP5.87□□□□□ -1.47
CLK3-212ENST00000563418 BPIFB2Q8N4F0 458 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 TCTEX1D1Q8N7M0 179 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 M1APQ8TC57 530 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 LRRC15Q8TF66 581 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 OR5P2Q8WZ92 322 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 MASTLQ96GX5 879 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 KIRREL1Q96J84 757 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 MSLNLQ96KJ4 702 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 ZIC5Q96T25 663 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 SLC2A9Q9NRM0 540 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 CYSLTR2Q9NS75 346 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 RHCGQ9UBD6 479 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 CCSO14618 274 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 CLDN11O75508 207 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 S1PR4O95977 384 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 ITGB7P26010 798 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 TIA1P31483 386 aaKnown RBP eCLIP5.86□□□□□ -1.47
CLK3-212ENST00000563418 PCBP4P57723 403 aaKnown RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 TAS2R30P59541 319 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 RPP30P78346 268 aaKnown RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 DSC2Q02487 901 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 BEX5Q5H9J7 111 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 MRPL52Q86TS9 123 aaKnown RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 GABRG1Q8N1C3 465 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 GPR119Q8TDV5 335 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 MS4A3Q96HJ5 214 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 PRRC1Q96M27 445 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 NSUN5Q96P11 429 aaKnown RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 P2RX7Q99572 595 aaKnown RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 SLC35B3Q9H1N7 401 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 SPATA31A5Q5VU36 1347 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 SPATA31A7Q8IWB4 1347 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 SPP2Q13103 211 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 RNLSQ5VYX0 342 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 SLC35F5Q8WV83 523 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 DPF1Q92782 380 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 NMUR1Q9HB89 426 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 GOLGA4Q13439 2230 aaKnown RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 GPR31O00270 319 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 GPR137BO60478 399 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 FBXO24O75426 580 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 C6orf47O95873 294 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 OR3A1P47881 315 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 PNRC1Q12796 327 aaPredicted RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 SIRPB2Q5JXA9 342 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 PRR27Q6MZM9 219 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 WDR88Q6ZMY6 472 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 FBXO22Q8NEZ5 403 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 OR2AK2Q8NG84 335 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 SCLYQ96I15 445 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 CXorf58Q96LI9 332 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 ASB16Q96NS5 453 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 PRR14Q9BWN1 585 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 SLC5A7Q9GZV3 580 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 PATZ1Q9HBE1 687 aaKnown RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 HMX2A2RU54 273 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 MFNGO00587 321 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 SIGLEC5O15389 551 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 NCBP2P52298 156 aaKnown RBP eCLIP5.86□□□□□ -1.47
CLK3-212ENST00000563418 LTBQ06643 244 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 SLC10A2Q12908 348 aaPredicted RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 SLC2A12Q8TD20 617 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 CCDC74AQ96AQ1 378 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 PRO1933Q9H354 126 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 GHITMQ9H3K2 345 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 USP54Q70EL1 1684 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 OR6C68A6NDL8 312 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 PLRG1O43660 514 aaKnown RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 FGF2P09038 288 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 ZNF888P0CJ79 500 aaPredicted RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 NME2P22392 152 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 RPL29P47914 159 aaKnown RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 SIM1P81133 766 aaPredicted RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 DNLZQ5SXM8 178 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 CNKSR3Q6P9H4 555 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 MAP3K3Q99759 626 aa5.86□□□□□ -1.47
CLK3-212ENST00000563418 ZCCHC3Q9NUD5 404 aaKnown RBP5.86□□□□□ -1.47
CLK3-212ENST00000563418 SIAH2O43255 324 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms