RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 SLC41A3Q96GZ6 507 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 WDYHV1Q96HA8 205 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 RSRC1Q96IZ7 334 aaKnown RBP16.96■□□□□ 0.31
RAB40C-207ENST00000563109 SEPHS2Q99611 448 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 PNPLA3Q9NST1 481 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 ZNF835Q9Y2P0 537 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 ENPP4Q9Y6X5 453 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 SVILO95425 2214 aa16.96■□□□□ 0.3
RAB40C-207ENST00000563109 DHRS12A0PJE2 317 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 TMEM72A0PK05 275 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 hCG_2039718K7EN88 272 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 EIF1AYO14602 144 aaKnown RBP16.95■□□□□ 0.3
RAB40C-207ENST00000563109 ZNF208O43345 1280 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 WDR1O75083 606 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 WISP1O95388 367 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 GPIP06744 558 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 THRBP10828 461 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 GABRA1P14867 456 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 HOXB6P17509 224 aaKnown RBP16.95■□□□□ 0.3
RAB40C-207ENST00000563109 CDH12P55289 794 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 TMEM176BQ3YBM2 270 aaPredicted RBP16.95■□□□□ 0.3
RAB40C-207ENST00000563109 GXYLT1Q4G148 440 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 SYT14P1Q58G82 188 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 Q6ZPB1 254 aaPredicted RBP16.95■□□□□ 0.3
RAB40C-207ENST00000563109 GGNQ86UU5 652 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 OR5B2Q96R09 309 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 FNDC11Q9BVV2 318 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 TP63Q9H3D4 680 aaPredicted RBP16.95■□□□□ 0.3
RAB40C-207ENST00000563109 ALKBH4Q9NXW9 302 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 SLC7A7Q9UM01 511 aa16.95■□□□□ 0.3
RAB40C-207ENST00000563109 ERICH4A6NGS2 130 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 A8MVM7 634 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 EFNA2O43921 213 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 OPN1LWP04000 364 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 SEMG1P04279 462 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 UMPSP11172 480 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 PTGER4P35408 488 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 YAP1P46937 504 aaKnown RBP16.94■□□□□ 0.3
RAB40C-207ENST00000563109 CLK1P49759 484 aaKnown RBP16.94■□□□□ 0.3
RAB40C-207ENST00000563109 CLDN20P56880 219 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 VLDLRP98155 873 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 ST3GAL3Q11203 375 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 PIN1Q13526 163 aaPredicted RBP16.94■□□□□ 0.3
RAB40C-207ENST00000563109 HBMQ6B0K9 141 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 GDF7Q7Z4P5 450 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 ZDHHC21Q8IVQ6 265 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 OFCC1Q8IZS5 231 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 OR2V1Q8NHB1 315 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 SLC38A4Q969I6 547 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 UTP4Q969X6 686 aaKnown RBP16.94■□□□□ 0.3
RAB40C-207ENST00000563109 MPP4Q96JB8 637 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 C7orf34Q96L11 122 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 ZNF300Q96RE9 604 aaPredicted RBP16.94■□□□□ 0.3
RAB40C-207ENST00000563109 TIGARQ9NQ88 270 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 PAQR5Q9NXK6 330 aaPredicted RBP16.94■□□□□ 0.3
RAB40C-207ENST00000563109 RIMS3Q9UJD0 308 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 AURKCQ9UQB9 309 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 OSGIN2Q9Y236 505 aa16.94■□□□□ 0.3
RAB40C-207ENST00000563109 CHD6Q8TD26 2715 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 A0A087WUJ7 227 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 TRGV8A0A0C4DH27 118 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 AHRRA9YTQ3 701 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 TNFSF11O14788 317 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 HOXD4P09016 255 aaPredicted RBP16.93■□□□□ 0.3
RAB40C-207ENST00000563109 RAP2AP10114 183 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 NQO1P15559 274 aaKnown RBP16.93■□□□□ 0.3
RAB40C-207ENST00000563109 RHCEP18577 417 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 GNLYP22749 145 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 SHC1P29353 583 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 EIF1AXP47813 144 aaKnown RBP16.93■□□□□ 0.3
RAB40C-207ENST00000563109 SGCBQ16585 318 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 C5orf46Q6UWT4 87 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 STK35Q8TDR2 534 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 ZNF347Q96SE7 839 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 OR11A1Q9GZK7 315 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 IL1RAPQ9NPH3 570 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 NDUFAF4Q9P032 175 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 SH3BGRL2Q9UJC5 107 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 A4GNTQ9UNA3 340 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 HDGFL3Q9Y3E1 203 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 ZGRF1Q86YA3 2104 aa16.93■□□□□ 0.3
RAB40C-207ENST00000563109 KALRNO60229 2985 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 TCRBV3S1A0A5B6 114 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 J3KTA2 159 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 AHSA1O95433 338 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 ACVR2AP27037 513 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 IDUAP35475 653 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 SUCLG1P53597 346 aaKnown RBP16.92■□□□□ 0.3
RAB40C-207ENST00000563109 CLDN15P56746 228 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 CSNK2A1P68400 391 aaPredicted RBP16.92■□□□□ 0.3
RAB40C-207ENST00000563109 GTF3C1Q12789 2109 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 TRAM2Q15035 370 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 C1orf185Q5T7R7 199 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 TTC33Q6PID6 262 aaPredicted RBP16.92■□□□□ 0.3
RAB40C-207ENST00000563109 TSPYL5Q86VY4 417 aaPredicted RBP16.92■□□□□ 0.3
RAB40C-207ENST00000563109 ADGRG5Q8IZF4 528 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 OR10D3Q8NH80 312 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 ZPLD1Q8TCW7 415 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 RELTQ969Z4 430 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 ADGRG7Q96K78 797 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms