RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 VASPP50552 380 aaPredicted RBP17.24■□□□□ 0.35
BBS4-204ENST00000562084 OR12D2P58182 307 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 GMFBP60983 142 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 IL10RAQ13651 578 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 CDK5R1Q15078 307 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 C9orf64Q5T6V5 341 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 SHEQ5VZ18 495 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 GSG1LQ6UXU4 331 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 MCATQ8IVS2 390 aaKnown RBP17.24■□□□□ 0.35
BBS4-204ENST00000562084 CDK20Q8IZL9 346 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 VN1R2Q8NFZ6 395 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 RAB40AQ8WXH6 277 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 CNOT9Q92600 299 aaKnown RBP17.24■□□□□ 0.35
BBS4-204ENST00000562084 MRPL48Q96GC5 212 aaKnown RBP17.24■□□□□ 0.35
BBS4-204ENST00000562084 LRFN5Q96NI6 719 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 SLC25A32Q9H2D1 315 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 ZNF576Q9H609 170 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 MED20Q9H944 212 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 CYB5R1Q9UHQ9 305 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 GPRIN2O60269 458 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 NTN1O95631 604 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 PROS1P07225 676 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 HOXB1P14653 301 aaPredicted RBP17.24■□□□□ 0.35
BBS4-204ENST00000562084 ATP5A1P25705 553 aaKnown RBP17.24■□□□□ 0.35
BBS4-204ENST00000562084 TEAD1P28347 426 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 PYCR1P32322 319 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 GDI2P50395 445 aaKnown RBP17.24■□□□□ 0.35
BBS4-204ENST00000562084 FOXK2Q01167 660 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 GPM6BQ13491 265 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 CEBPEQ15744 281 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 RPL22L1Q6P5R6 122 aaKnown RBP17.24■□□□□ 0.35
BBS4-204ENST00000562084 UNQ9370/PRO34162Q6UXP9 181 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 APOOLQ6UXV4 268 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 GAREM2Q75VX8 874 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 ZNF547Q8IVP9 402 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 CDH26Q8IXH8 852 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 OR5M9Q8NGP3 310 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 OR5K2Q8NHB8 316 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 NSMAFQ92636 917 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 TFGQ92734 400 aaPredicted RBP17.24■□□□□ 0.35
BBS4-204ENST00000562084 SEC22CQ9BRL7 303 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 POLMQ9NP87 494 aaPredicted RBP17.24■□□□□ 0.35
BBS4-204ENST00000562084 ATPIF1Q9UII2 106 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 PLAGL1Q9UM63 463 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 DENND4CQ5VZ89 1909 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 FEZF1A0PJY2 475 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 ZC3H12DA2A288 527 aaKnown RBP17.23■□□□□ 0.35
BBS4-204ENST00000562084 LRIT2A6NDA9 550 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 ANTXRLA6NF34 631 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 H7BY64 318 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 RFXAPO00287 272 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 KPNA3O00505 521 aaPredicted RBP17.23■□□□□ 0.35
BBS4-204ENST00000562084 ERAL1O75616 437 aaKnown RBP17.23■□□□□ 0.35
BBS4-204ENST00000562084 CTSLP07711 333 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 THBS1P07996 1170 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 ZNF3P17036 446 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 GPR1P46091 355 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 KIAA1024LP59773 190 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 B2MP61769 119 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 DPTQ07507 201 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 MPPED2Q15777 294 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 MRM1Q6IN84 353 aaKnown RBP17.23■□□□□ 0.35
BBS4-204ENST00000562084 LRFN4Q6PJG9 635 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 TMPRSS11FQ6ZWK6 438 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 STPG2Q8N412 459 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 RAB42Q8N4Z0 105 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 OR5J2Q8NH18 312 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 OR52I2Q8NH67 350 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 ORAI1Q96D31 301 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 NUS1Q96E22 293 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 PRAP1Q96NZ9 151 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 HCAR1Q9BXC0 346 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 C1QTNF6Q9BXI9 259 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 CA10Q9NS85 328 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 ATG2AQ2TAZ0 1938 aa17.23■□□□□ 0.35
BBS4-204ENST00000562084 ACOT7O00154 380 aa17.22■□□□□ 0.35
BBS4-204ENST00000562084 SDC3O75056 442 aa17.22■□□□□ 0.35
BBS4-204ENST00000562084 EGFP01133 1207 aa17.22■□□□□ 0.35
BBS4-204ENST00000562084 FAUP35544 74 aaKnown RBP17.22■□□□□ 0.35
BBS4-204ENST00000562084 MAZP56270 477 aaKnown RBP17.22■□□□□ 0.35
BBS4-204ENST00000562084 FXYD6P3P58550 94 aa17.22■□□□□ 0.35
BBS4-204ENST00000562084 STXBP1P61764 594 aaKnown RBP17.22■□□□□ 0.35
BBS4-204ENST00000562084 PUS10Q3MIT2 529 aaKnown RBP17.22■□□□□ 0.35
BBS4-204ENST00000562084 OR5M10Q6IEU7 315 aa17.22■□□□□ 0.35
BBS4-204ENST00000562084 FAM199XQ6PEV8 388 aaPredicted RBP17.22■□□□□ 0.35
BBS4-204ENST00000562084 CCDC116Q8IYX3 515 aa17.22■□□□□ 0.35
BBS4-204ENST00000562084 C2orf73Q8N5S3 287 aaPredicted RBP17.22■□□□□ 0.35
BBS4-204ENST00000562084 AMER3Q8N944 861 aa17.22■□□□□ 0.35
BBS4-204ENST00000562084 ZNF454Q8N9F8 522 aa17.22■□□□□ 0.35
BBS4-204ENST00000562084 OR1S1Q8NH92 325 aa17.22■□□□□ 0.35
BBS4-204ENST00000562084 MARC2Q969Z3 335 aa17.22■□□□□ 0.35
BBS4-204ENST00000562084 CNRIP1Q96F85 164 aaPredicted RBP17.22■□□□□ 0.35
BBS4-204ENST00000562084 S100A16Q96FQ6 103 aaKnown RBP17.22■□□□□ 0.35
BBS4-204ENST00000562084 MRGPRX3Q96LB0 322 aa17.22■□□□□ 0.35
BBS4-204ENST00000562084 PRSS27Q9BQR3 290 aa17.22■□□□□ 0.35
BBS4-204ENST00000562084 DPH1Q9BZG8 443 aa17.22■□□□□ 0.35
BBS4-204ENST00000562084 CDH23Q9H251 3354 aa17.22■□□□□ 0.35
BBS4-204ENST00000562084 ANXA2P2A6NMY6 339 aa17.22■□□□□ 0.35
BBS4-204ENST00000562084 SELENOFO60613 162 aa17.22■□□□□ 0.35
BBS4-204ENST00000562084 IFNGP01579 166 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms