RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 SLC25A43Q8WUT9 341 aaPredicted RBP9.12□□□□□ -0.95
CLK3-205ENST00000561673 IGFBPL1Q8WX77 278 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 HSD17B8Q92506 261 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 KISS1RQ969F8 398 aaPredicted RBP9.12□□□□□ -0.95
CLK3-205ENST00000561673 DNAJA3Q96EY1 480 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 ARL5BQ96KC2 179 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 OR52B2Q96RD2 323 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 SMR3AQ99954 134 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 TMEM204Q9BSN7 226 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 OR11A1Q9GZK7 315 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 PRSS50Q9UI38 385 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 SPIN1Q9Y657 262 aaPredicted RBP9.12□□□□□ -0.95
CLK3-205ENST00000561673 HEATR5AQ86XA9 2040 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 HS3ST1O14792 307 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 KLF11O14901 512 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 UBDO15205 165 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 LYZL6O75951 148 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 KRT75O95678 551 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 PMS2P2O95744 297 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 ETFAP13804 333 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 IL7RP16871 459 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 CCNA2P20248 432 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 FKBP2P26885 142 aaKnown RBP9.11□□□□□ -0.95
CLK3-205ENST00000561673 NTF4P34130 210 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 ANXA11P50995 505 aaKnown RBP9.11□□□□□ -0.95
CLK3-205ENST00000561673 MVDP53602 400 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 TAB1Q15750 504 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 Q5PR19 223 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 PRSS57Q6UWY2 283 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 BHLHA15Q7RTS1 189 aaPredicted RBP9.11□□□□□ -0.95
CLK3-205ENST00000561673 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.11□□□□□ -0.95
CLK3-205ENST00000561673 GALNT5Q7Z7M9 940 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 CCDC103Q8IW40 242 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 LILRB1Q8NHL6 650 aaPredicted RBP9.11□□□□□ -0.95
CLK3-205ENST00000561673 PIWIL2Q8TC59 973 aaKnown RBP9.11□□□□□ -0.95
CLK3-205ENST00000561673 AKAP1Q92667 903 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLK3-205ENST00000561673 PMM1Q92871 262 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 PERPQ96FX8 193 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 C18orf12Q96KH6 178 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 ALG2Q9H553 416 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 SDR39U1Q9NRG7 319 aaPredicted RBP9.11□□□□□ -0.95
CLK3-205ENST00000561673 RLIMQ9NVW2 624 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 ZIM2Q9NZV7 527 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 HDGFL3Q9Y3E1 203 aa9.11□□□□□ -0.95
CLK3-205ENST00000561673 IGKV3D-15A0A087WSY6 115 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 TMED7-TICAM2A0A0A6YYA0 188 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 TMEM72A0PK05 275 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 CFAP73A6NFT4 308 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 RAMP1O60894 148 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 DBIP07108 87 aaKnown RBP9.1□□□□□ -0.95
CLK3-205ENST00000561673 INHBBP09529 407 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 TFPTP0C1Z6 253 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 HOXB4P17483 251 aaPredicted RBP9.1□□□□□ -0.95
CLK3-205ENST00000561673 IGHV1-2P23083 117 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 SLC1A3P43003 542 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 CRATP43155 626 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 MAGEA8P43361 318 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 HTR3AP46098 478 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 CLK1P49759 484 aaKnown RBP9.1□□□□□ -0.95
CLK3-205ENST00000561673 POLR2HP52434 150 aaKnown RBP9.1□□□□□ -0.95
CLK3-205ENST00000561673 POLR2JP52435 117 aaKnown RBP9.1□□□□□ -0.95
CLK3-205ENST00000561673 OR2B6P58173 313 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 GNA13Q14344 377 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 CAPRIN1Q14444 709 aaKnown RBP9.1□□□□□ -0.95
CLK3-205ENST00000561673 PDK3Q15120 406 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 GTDC1Q4AE62 458 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 NCMAPQ5T1S8 102 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 MRPL2Q5T653 305 aaKnown RBP9.1□□□□□ -0.95
CLK3-205ENST00000561673 ABLIM2Q6H8Q1 611 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 EPGNQ6UW88 154 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 SEZ6L2Q6UXD5 910 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 DNAJC14Q6Y2X3 702 aaPredicted RBP9.1□□□□□ -0.95
CLK3-205ENST00000561673 YTHDF3Q7Z739 585 aaKnown RBP9.1□□□□□ -0.95
CLK3-205ENST00000561673 ATG4DQ86TL0 474 aaPredicted RBP9.1□□□□□ -0.95
CLK3-205ENST00000561673 BIVMQ86UB2 503 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 PEX5LQ8IYB4 626 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 ZNF100Q8IYN0 542 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 CIARTQ8N365 385 aaPredicted RBP9.1□□□□□ -0.95
CLK3-205ENST00000561673 OR9I1Q8NGQ6 314 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 SLC38A5Q8WUX1 472 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 WDR60Q8WVS4 1066 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 VPS33AQ96AX1 596 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 ITCHQ96J02 903 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 Q96MF0 132 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 USB1Q9BQ65 265 aaKnown RBP9.1□□□□□ -0.95
CLK3-205ENST00000561673 GSX2Q9BZM3 304 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 ADAM19Q9H013 955 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 TPT1P8Q9HAU6 139 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 EMC3Q9P0I2 261 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 TMEM181Q9P2C4 612 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 P2RX2Q9UBL9 471 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 OSGIN1Q9UJX0 560 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 TRAPPC4Q9Y296 219 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 TMED7Q9Y3B3 224 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 USH1CQ9Y6N9 552 aa9.1□□□□□ -0.95
CLK3-205ENST00000561673 ZC3H12DA2A288 527 aaKnown RBP9.09□□□□□ -0.95
CLK3-205ENST00000561673 CDHR4A6H8M9 788 aa9.09□□□□□ -0.95
CLK3-205ENST00000561673 DPRXA6NFQ7 191 aa9.09□□□□□ -0.95
CLK3-205ENST00000561673 ZNF716A6NP11 495 aa9.09□□□□□ -0.95
CLK3-205ENST00000561673 FAAHO00519 579 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms