RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 FAM74A7A6NL05 159 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 C4orf51C9J302 202 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 LINC01387J3KSC0 135 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 HMGN4O00479 90 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 GNB5O14775 395 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 SCAMP1O15126 338 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 SLC31A1O15431 190 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 RNF13O43567 381 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 OR12D1P0DN82 309 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 IFNGR1P15260 489 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 SEC61A1P61619 476 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 PPP2CBP62714 309 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 PPP2CAP67775 309 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 FAM74A3Q4VXF1 159 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 ACSM5Q6NUN0 579 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 ZC3H14Q6PJT7 736 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 SMARCD3Q6STE5 483 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 ALKAL2Q6UX46 152 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 PAQR7Q86WK9 346 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 NR2C2APQ86WQ0 139 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 OR2L3Q8NG85 312 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 OR1M1Q8NGA1 313 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 GPR32P1Q8NGA4 272 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 TEX47Q8TBZ9 253 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 HAVCR2Q8TDQ0 301 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 ORAI1Q96D31 301 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 ZNF354BQ96LW1 612 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 AMDHD1Q96NU7 426 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 RSPO3Q9BXY4 272 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 GLIPR2Q9H4G4 154 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 FBRSQ9HAH7 460 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 BABAM2Q9NXR7 383 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 SPHK1Q9NYA1 384 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 RASD1Q9Y272 281 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 SLC9A8Q9Y2E8 581 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 TRABD2BA6NFA1 517 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 HIST1H2ABP04908 130 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 ATP5A1P25705 553 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 AHRP35869 848 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 CD79BP40259 229 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 HTR4Q13639 388 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 CDC73Q6P1J9 531 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 C1orf94Q6P1W5 598 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 GSG1LQ6UXU4 331 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 TMUB2Q71RG4 321 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 HIST3H2AQ7L7L0 130 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 SLC7A13Q8TCU3 470 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 GNPDA2Q8TDQ7 276 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 HIST1H2ACQ93077 130 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 MS4A6EQ96DS6 147 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 OR2M4Q96R27 311 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 MACROD1Q9BQ69 325 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 GPN1Q9HCN4 374 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 NLGN3Q9NZ94 848 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 CLEC1BQ9P126 229 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 MSRAQ9UJ68 235 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 FBXL3Q9UKT7 428 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 CAMK2AQ9UQM7 478 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 PRSS38A1L453 326 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 SNRPGP15A8MWD9 76 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 MAN2B1O00754 1011 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 HYAL3O43820 417 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 KLF8O95600 359 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 ECDO95905 644 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 EGFP01133 1207 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 MT-ND4P03905 459 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 CD3GP09693 182 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 SAGP10523 405 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 HOXB2P14652 356 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 CDH11P55287 796 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 AP3S2P59780 193 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 RAB8AP61006 207 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 FOXD4Q12950 439 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 MICBQ29980 383 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 ABHD17CQ6PCB6 329 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 ZNF322Q6U7Q0 402 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 PGAP1Q75T13 922 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 CCDC36Q8IYA8 594 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 SPRYD4Q8WW59 207 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 ASB12Q8WXK4 309 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 TREX2Q9BQ50 279 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 ESRP2Q9H6T0 727 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 KIR3DX1Q9H7L2 352 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 PLEKHA1Q9HB21 404 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 PRDM7Q9NQW5 492 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 PCDHGA9Q9Y5G4 932 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 HEBP2Q9Y5Z4 205 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 NINQ8N4C6 2090 aa12.92□□□□□ -0.34
RABGGTA-220ENST00000560998 RANBP2P49792 3224 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 MDC1Q14676 2089 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 ANHXE9PGG2 379 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 ERI3O43414 337 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 PRAMEF2O60811 474 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 PRKRAO75569 313 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 UBXN7O94888 489 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 HOXC4P09017 264 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 SMIM6P0DI80 62 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 POU3F2P20265 443 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 PSMB1P20618 241 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 HIST1H1TP22492 207 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms