RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 CDKL2Q92772 493 aa8.85□□□□□ -0.99
APH1B-208ENST00000560353 HOXB13Q92826 284 aaPredicted RBP8.85□□□□□ -0.99
APH1B-208ENST00000560353 C1orf147Q96MC9 270 aaPredicted RBP8.85□□□□□ -0.99
APH1B-208ENST00000560353 CITED1Q99966 193 aa8.85□□□□□ -0.99
APH1B-208ENST00000560353 ZNF416Q9BWM5 594 aa8.85□□□□□ -0.99
APH1B-208ENST00000560353 TPK1Q9H3S4 243 aa8.85□□□□□ -0.99
APH1B-208ENST00000560353 MS4A5Q9H3V2 200 aa8.85□□□□□ -0.99
APH1B-208ENST00000560353 ZNF665Q9H7R5 613 aa8.85□□□□□ -0.99
APH1B-208ENST00000560353 EQTNQ9NQ60 294 aa8.85□□□□□ -0.99
APH1B-208ENST00000560353 SERINC1Q9NRX5 453 aa8.85□□□□□ -0.99
APH1B-208ENST00000560353 SLC7A10Q9NS82 523 aa8.85□□□□□ -0.99
APH1B-208ENST00000560353 OPN4Q9UHM6 478 aa8.85□□□□□ -0.99
APH1B-208ENST00000560353 ZDHHC2Q9UIJ5 367 aa8.85□□□□□ -0.99
APH1B-208ENST00000560353 H3BNH8 94 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 GTPBP1O00178 669 aaKnown RBP8.84□□□□□ -0.99
APH1B-208ENST00000560353 OIP5O43482 229 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 SYNGR3O43761 229 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 PRPS2P11908 318 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 CDH2P19022 906 aaPredicted RBP8.84□□□□□ -0.99
APH1B-208ENST00000560353 DDCP20711 480 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 SPRP35270 261 aaPredicted RBP8.84□□□□□ -0.99
APH1B-208ENST00000560353 MAP3K8P41279 467 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 GSTM5P46439 218 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 TRAF3Q13114 568 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 RHOUQ7L0Q8 258 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 REC114Q7Z4M0 266 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 ZAR1Q86SH2 424 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 TMEM139Q8IV31 216 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 TMEM151AQ8N4L1 468 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 CDRT4Q8N9R6 151 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 RAB39BQ96DA2 213 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 AMDHD1Q96NU7 426 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 RBM4BQ9BQ04 359 aaKnown RBP8.84□□□□□ -0.99
APH1B-208ENST00000560353 GLIPR2Q9H4G4 154 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 BEX1Q9HBH7 125 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 OXSMQ9NWU1 459 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 TAS2R7Q9NYW3 318 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 CPSF2Q9P2I0 782 aaKnown RBP8.84□□□□□ -0.99
APH1B-208ENST00000560353 REV1Q9UBZ9 1251 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 MID2Q9UJV3 735 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 CARD8Q9Y2G2 431 aa8.84□□□□□ -0.99
APH1B-208ENST00000560353 CXorf49A8MYA2 514 aaPredicted RBP8.83□□□□□ -1
APH1B-208ENST00000560353 ETV2O00321 342 aaPredicted RBP8.83□□□□□ -1
APH1B-208ENST00000560353 HPXP02790 462 aa8.83□□□□□ -1
APH1B-208ENST00000560353 CECR9P0C854 216 aa8.83□□□□□ -1
APH1B-208ENST00000560353 HSD3B1P14060 373 aa8.83□□□□□ -1
APH1B-208ENST00000560353 OMGP23515 440 aa8.83□□□□□ -1
APH1B-208ENST00000560353 HSD3B2P26439 372 aa8.83□□□□□ -1
APH1B-208ENST00000560353 IVDP26440 423 aa8.83□□□□□ -1
APH1B-208ENST00000560353 CALCRP30988 508 aa8.83□□□□□ -1
APH1B-208ENST00000560353 NTSP30990 170 aa8.83□□□□□ -1
APH1B-208ENST00000560353 PCGF2P35227 344 aa8.83□□□□□ -1
APH1B-208ENST00000560353 MAGEA8P43361 318 aa8.83□□□□□ -1
APH1B-208ENST00000560353 EVX1P49640 407 aa8.83□□□□□ -1
APH1B-208ENST00000560353 UBE2NP61088 152 aaKnown RBP8.83□□□□□ -1
APH1B-208ENST00000560353 RAE1P78406 368 aaKnown RBP8.83□□□□□ -1
APH1B-208ENST00000560353 PDIA2Q13087 525 aaKnown RBP8.83□□□□□ -1
APH1B-208ENST00000560353 QPRTQ15274 297 aa8.83□□□□□ -1
APH1B-208ENST00000560353 SLC9A3R2Q15599 337 aa8.83□□□□□ -1
APH1B-208ENST00000560353 KLHL26Q53HC5 615 aa8.83□□□□□ -1
APH1B-208ENST00000560353 ZNF362Q5T0B9 420 aaPredicted RBP8.83□□□□□ -1
APH1B-208ENST00000560353 TSPO2Q5TGU0 170 aa8.83□□□□□ -1
APH1B-208ENST00000560353 CCDC91Q7Z6B0 441 aa8.83□□□□□ -1
APH1B-208ENST00000560353 CMC1Q7Z7K0 106 aa8.83□□□□□ -1
APH1B-208ENST00000560353 GAS2L3Q86XJ1 694 aa8.83□□□□□ -1
APH1B-208ENST00000560353 FAM169BQ8N8A8 192 aa8.83□□□□□ -1
APH1B-208ENST00000560353 OR4F6Q8NGB9 312 aa8.83□□□□□ -1
APH1B-208ENST00000560353 TAF15Q92804 592 aaKnown RBP eCLIP8.83□□□□□ -1
APH1B-208ENST00000560353 MS4A14Q96JA4 679 aa8.83□□□□□ -1
APH1B-208ENST00000560353 PKNOX2Q96KN3 472 aa8.83□□□□□ -1
APH1B-208ENST00000560353 MIEF1Q9NQG6 463 aa8.83□□□□□ -1
APH1B-208ENST00000560353 ZNF275Q9NSD4 429 aaPredicted RBP8.83□□□□□ -1
APH1B-208ENST00000560353 TMEM45AQ9NWC5 275 aa8.83□□□□□ -1
APH1B-208ENST00000560353 CRNNQ9UBG3 495 aaPredicted RBP8.83□□□□□ -1
APH1B-208ENST00000560353 NUP50Q9UKX7 468 aa8.83□□□□□ -1
APH1B-208ENST00000560353 SLC9A8Q9Y2E8 581 aa8.83□□□□□ -1
APH1B-208ENST00000560353 COL7A1Q02388 2944 aa8.82□□□□□ -1
APH1B-208ENST00000560353 SLC22A31A6NKX4 558 aa8.82□□□□□ -1
APH1B-208ENST00000560353 M0R233 179 aa8.82□□□□□ -1
APH1B-208ENST00000560353 DNPH1O43598 174 aa8.82□□□□□ -1
APH1B-208ENST00000560353 OTCP00480 354 aa8.82□□□□□ -1
APH1B-208ENST00000560353 IGLV1-44P01699 117 aa8.82□□□□□ -1
APH1B-208ENST00000560353 GSNP06396 782 aa8.82□□□□□ -1
APH1B-208ENST00000560353 ANXA4P09525 319 aaPredicted RBP8.82□□□□□ -1
APH1B-208ENST00000560353 ANP32AP39687 249 aaKnown RBP8.82□□□□□ -1
APH1B-208ENST00000560353 TNP2Q05952 138 aa8.82□□□□□ -1
APH1B-208ENST00000560353 ACSM2AQ08AH3 577 aa8.82□□□□□ -1
APH1B-208ENST00000560353 C2orf80Q0P641 193 aa8.82□□□□□ -1
APH1B-208ENST00000560353 FASTKD3Q14CZ7 662 aaKnown RBP8.82□□□□□ -1
APH1B-208ENST00000560353 PRSS53Q2L4Q9 553 aa8.82□□□□□ -1
APH1B-208ENST00000560353 TIGD2Q4W5G0 525 aa8.82□□□□□ -1
APH1B-208ENST00000560353 SPIN4Q56A73 249 aa8.82□□□□□ -1
APH1B-208ENST00000560353 SYT14P1Q58G82 188 aa8.82□□□□□ -1
APH1B-208ENST00000560353 GRTP1Q5TC63 336 aa8.82□□□□□ -1
APH1B-208ENST00000560353 ACSM2BQ68CK6 577 aa8.82□□□□□ -1
APH1B-208ENST00000560353 ASPHD2Q6ICH7 369 aa8.82□□□□□ -1
APH1B-208ENST00000560353 KLC3Q6P597 504 aa8.82□□□□□ -1
APH1B-208ENST00000560353 C16orf87Q6PH81 154 aa8.82□□□□□ -1
APH1B-208ENST00000560353 LRIG3Q6UXM1 1119 aa8.82□□□□□ -1
APH1B-208ENST00000560353 SPATC1Q76KD6 591 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms