RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 ARMC7Q9H6L4 198 aa18.54■□□□□ 0.56
PSEN1-225ENST00000560005 Q9N2J8 555 aa18.54■□□□□ 0.56
PSEN1-225ENST00000560005 KLHL28Q9NXS3 571 aa18.54■□□□□ 0.56
PSEN1-225ENST00000560005 MRTO4Q9UKD2 239 aaKnown RBP18.54■□□□□ 0.56
PSEN1-225ENST00000560005 CAMK2AQ9UQM7 478 aa18.54■□□□□ 0.56
PSEN1-225ENST00000560005 SLC9A8Q9Y2E8 581 aa18.54■□□□□ 0.56
PSEN1-225ENST00000560005 WDR45Q9Y484 360 aa18.54■□□□□ 0.56
PSEN1-225ENST00000560005 PRAMEF27A3QJZ7 478 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 SH3D21A4FU49 640 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 OR6C76A6NM76 312 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 ADAMDEC1O15204 470 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 IFNW1P05000 195 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 CHRM4P08173 479 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 ACADSP16219 412 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 LARS2Q15031 903 aaKnown RBP18.53■□□□□ 0.56
PSEN1-225ENST00000560005 LRRC36Q1X8D7 754 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 DCST2Q5T1A1 773 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 VTCN1Q7Z7D3 282 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 GALNT10Q86SR1 603 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 CYP4Z1Q86W10 505 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 HIPK1Q86Z02 1210 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 ZDHHC13Q8IUH4 622 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 PM20D2Q8IYS1 436 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 ZNF615Q8N8J6 731 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 OR5K1Q8NHB7 308 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 OIT3Q8WWZ8 545 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 C7orf34Q96L11 122 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 VSTM2LQ96N03 204 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 BTBD9Q96Q07 612 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 PIP5K1AQ99755 562 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 G6PC3Q9BUM1 346 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 PRDM14Q9GZV8 571 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 SAP130Q9H0E3 1048 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 SLC38A1Q9H2H9 487 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 CNIH4Q9P003 139 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 C15orf41Q9Y2V0 281 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 CHCHD2Q9Y6H1 151 aaPredicted RBP18.53■□□□□ 0.56
PSEN1-225ENST00000560005 KCNE3Q9Y6H6 103 aa18.53■□□□□ 0.56
PSEN1-225ENST00000560005 DSPPQ9NZW4 1301 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 DOCK7Q96N67 2140 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 MBD3L4A6NDZ8 208 aaPredicted RBP18.52■□□□□ 0.56
PSEN1-225ENST00000560005 MBD3L3A6NE82 208 aaPredicted RBP18.52■□□□□ 0.56
PSEN1-225ENST00000560005 MBD3L5A6NJ08 208 aaPredicted RBP18.52■□□□□ 0.56
PSEN1-225ENST00000560005 CD8B2A6NJW9 211 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 TRAPPC6AO75865 159 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 OPN1SWP03999 348 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 FESP07332 822 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 ZNF23P17027 643 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 CD247P20963 164 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 ATP6V1C1P21283 382 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 PRKAR1BP31321 381 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 SSTR4P31391 388 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 PSMD4P55036 377 aaKnown RBP18.52■□□□□ 0.56
PSEN1-225ENST00000560005 FUT5Q11128 374 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 SF3B4Q15427 424 aaKnown RBP eCLIP18.52■□□□□ 0.561e-6■■■□□ 16.5
PSEN1-225ENST00000560005 RPS26P11Q5JNZ5 115 aaPredicted RBP18.52■□□□□ 0.56
PSEN1-225ENST00000560005 IZUMO2Q6UXV1 221 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 ZNF619Q8N2I2 560 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 MBD3L2Q8NHZ7 208 aaPredicted RBP18.52■□□□□ 0.56
PSEN1-225ENST00000560005 PIGTQ969N2 578 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 RBM24Q9BX46 236 aaKnown RBP18.52■□□□□ 0.56
PSEN1-225ENST00000560005 ZNF350Q9GZX5 532 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 Q9H521 79 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 REEP1Q9H902 201 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 GALNT8Q9NY28 637 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 SLC6A5Q9Y345 797 aa18.52■□□□□ 0.56
PSEN1-225ENST00000560005 SONP18583 2426 aaKnown RBP18.51■□□□□ 0.55
PSEN1-225ENST00000560005 E2F6O75461 281 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 IL18BPO95998 194 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 DBIP07108 87 aaKnown RBP18.51■□□□□ 0.55
PSEN1-225ENST00000560005 THBS1P07996 1170 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 PABPC4LP0CB38 370 aaKnown RBP18.51■□□□□ 0.55
PSEN1-225ENST00000560005 RHCEP18577 417 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 LCN1P31025 176 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 PPICP45877 212 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 SMIM11AP58511 58 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 CHRNEQ04844 493 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 CYP27C1Q4G0S4 372 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 EIPR1Q53HC9 387 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 ZNF311Q5JNZ3 666 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 HLA-DQA1Q5Y7H0 255 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 DHRS4L2Q6PKH6 230 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 PRSS57Q6UWY2 283 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 SLC15A4Q8N697 577 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 SMYD1Q8NB12 490 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 TMBIM1Q969X1 311 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 ZNF597Q96LX8 424 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 CIB1Q99828 191 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 COQ10BQ9H8M1 238 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 SH3GLB1Q9Y371 365 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 ENPP4Q9Y6X5 453 aa18.51■□□□□ 0.55
PSEN1-225ENST00000560005 TMEM229AB2RXF0 380 aa18.5■□□□□ 0.55
PSEN1-225ENST00000560005 G3V2T6 193 aa18.5■□□□□ 0.55
PSEN1-225ENST00000560005 HRKO00198 91 aa18.5■□□□□ 0.55
PSEN1-225ENST00000560005 CASKO14936 926 aa18.5■□□□□ 0.55
PSEN1-225ENST00000560005 MT-ND1P03886 318 aa18.5■□□□□ 0.55
PSEN1-225ENST00000560005 IGKV3-11P04433 115 aa18.5■□□□□ 0.55
PSEN1-225ENST00000560005 FBXO45P0C2W1 286 aa18.5■□□□□ 0.55
PSEN1-225ENST00000560005 ZNF26P17031 533 aaPredicted RBP18.5■□□□□ 0.55
PSEN1-225ENST00000560005 DRD5P21918 477 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms