RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 TMPRSS3P57727 454 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 AP2B1P63010 937 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 CHRNB3Q05901 458 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 SEC23BQ15437 767 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 OR1Q1Q15612 314 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 ATP6AP1Q15904 470 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 LRRC36Q1X8D7 754 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 EXOC3L2Q2M3D2 409 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 LINC00303Q3SY05 128 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 FAM98BQ52LJ0 330 aaKnown RBP4.73□□□□□ -1.65
SPG11-220ENST00000559933 EIPR1Q53HC9 387 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 FGD3Q5JSP0 725 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 ENTPD8Q5MY95 495 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 IRAK1BP1Q5VVH5 260 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 BROXQ5VW32 411 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 JMJD6Q6NYC1 403 aaPredicted RBP4.73□□□□□ -1.65
SPG11-220ENST00000559933 TBPL2Q6SJ96 375 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 OPN5Q6U736 354 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 PLXDC2Q6UX71 529 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 ISLR2Q6UXK2 745 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 RTL4Q6ZR62 310 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 NUP54Q7Z3B4 507 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 GALNTL5Q7Z4T8 443 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 NKAIN4Q8IVV8 208 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 EID3Q8N140 333 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 SLC15A4Q8N697 577 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 METTL25Q8N6Q8 603 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 ZNF527Q8NB42 609 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 OR9Q2Q8NGE9 314 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 OR52E4Q8NGH9 312 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 PFN4Q8NHR9 129 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 B4GALNT2Q8NHY0 566 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 PAQR8Q8TEZ7 354 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 LZICQ8WZA0 190 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 TMCO6Q96DC7 493 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 SLC41A3Q96GZ6 507 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 GNRHR2Q96P88 292 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 ZNF300Q96RE9 604 aaPredicted RBP4.73□□□□□ -1.65
SPG11-220ENST00000559933 MCHR1Q99705 422 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 UTP23Q9BRU9 249 aaKnown RBP4.73□□□□□ -1.65
SPG11-220ENST00000559933 SPATA5L1Q9BVQ7 753 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 UGT2B28Q9BY64 529 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 DSN1Q9H410 356 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 TMEM185BQ9H7F4 350 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 RNPEPL1Q9HAU8 725 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 NTN4Q9HB63 628 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 CACYBPQ9HB71 228 aaKnown RBP4.73□□□□□ -1.65
SPG11-220ENST00000559933 IL1RAPQ9NPH3 570 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.73□□□□□ -1.65
SPG11-220ENST00000559933 CCM2LQ9NUG4 571 aaPredicted RBP4.73□□□□□ -1.65
SPG11-220ENST00000559933 TUBA8Q9NY65 449 aaPredicted RBP4.73□□□□□ -1.65
SPG11-220ENST00000559933 PPP4R1LQ9P1A2 415 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 MRTO4Q9UKD2 239 aaKnown RBP4.73□□□□□ -1.65
SPG11-220ENST00000559933 RALYQ9UKM9 306 aaKnown RBP4.73□□□□□ -1.65
SPG11-220ENST00000559933 BAG5Q9UL15 447 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 SLC7A7Q9UM01 511 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 ICAM5Q9UMF0 924 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 A4GNTQ9UNA3 340 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 VDAC3Q9Y277 283 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 RPH3AQ9Y2J0 694 aaPredicted RBP4.73□□□□□ -1.65
SPG11-220ENST00000559933 IFT52Q9Y366 437 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 PCDHGB7Q9Y5F8 929 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 LIPGQ9Y5X9 500 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 NBEAQ8NFP9 2946 aa4.73□□□□□ -1.65
SPG11-220ENST00000559933 IGKV1D-42A0A075B6H8 117 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 A0A1W2PQD3 144 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 ZC3H12DA2A288 527 aaKnown RBP4.72□□□□□ -1.65
SPG11-220ENST00000559933 LRRN3E7EW58 273 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 SYT5O00445 386 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 SOCS2O14508 198 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 TP53I11O14683 189 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 CLOCKO15516 846 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 PEX1O43933 1283 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 NME2P1O60361 137 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 MITFO75030 526 aaPredicted RBP4.72□□□□□ -1.65
SPG11-220ENST00000559933 TRIM3O75382 744 aaPredicted RBP4.72□□□□□ -1.65
SPG11-220ENST00000559933 NUDT14O95848 222 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 IFNA14P01570 189 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 P04436 131 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 SP1P08047 785 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 GUSBP08236 651 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 PEPDP12955 493 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 NAGAP17050 411 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 PRKCAP17252 672 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 KLK2P20151 261 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 PRKACGP22612 351 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 CBLP22681 906 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 CASRP41180 1078 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 MASP1P48740 699 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 P2RX1P51575 399 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 UGT2B15P54855 530 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 TAS2R41P59536 307 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 FOXO1Q12778 655 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 QPRTQ15274 297 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 TRIP10Q15642 601 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 NADK2Q4G0N4 442 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 GXYLT1Q4G148 440 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 PRR30Q53SZ7 412 aaPredicted RBP4.72□□□□□ -1.65
SPG11-220ENST00000559933 ZNF766Q5HY98 468 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms