RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 SLC22A25Q6T423 547 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 KLHL17Q6TDP4 642 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 B3GLCTQ6Y288 498 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 OLIG3Q7RTU3 272 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 C16orf62Q7Z3J2 963 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 C6orf120Q7Z4R8 191 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 CLECL1Q8IZS7 167 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 PIGXQ8TBF5 258 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 APH1AQ96BI3 265 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 ZHX1-C8orf76Q96EF9 292 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 EXD2Q9NVH0 621 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 ASB6Q9NWX5 421 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 TAS2R16Q9NYV7 291 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 CHRNA9Q9UGM1 479 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 ZDHHC2Q9UIJ5 367 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 CDC42EP3Q9UKI2 254 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 SLC35A3Q9Y2D2 325 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 NOSIPQ9Y314 301 aaKnown RBP11.52□□□□□ -0.57
TPM1-220ENST00000559556 HDGFL3Q9Y3E1 203 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 SPIN1Q9Y657 262 aaPredicted RBP11.52□□□□□ -0.57
TPM1-220ENST00000559556 CIB4A0PJX0 185 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 FAM234BA2RU67 622 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 PDLIM1O00151 329 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 RNASET2O00584 256 aaKnown RBP11.51□□□□□ -0.57
TPM1-220ENST00000559556 GPR171O14626 319 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 ANKRD28O15084 1053 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 IGHV3-9P01782 118 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 ITGA5P08648 1049 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 SLC25A16P16260 332 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 ZNF83P51522 516 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 PLAURQ03405 335 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 MAPK14Q16539 360 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 SMU1Q2TAY7 513 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 PGS1Q32NB8 556 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 OR4F3Q6IEY1 312 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 OR7E24Q6IFN5 339 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 TYW3Q6IPR3 259 aaKnown RBP11.51□□□□□ -0.57
TPM1-220ENST00000559556 GRINAQ7Z429 371 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 FBXL14Q8N1E6 418 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 CLEC4FQ8N1N0 589 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 UBE2J2Q8N2K1 259 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 MUC15Q8N387 334 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 OR8J2Q8NGG1 315 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 OR52N5Q8NH56 324 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 TMEM158Q8WZ71 300 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 TUBGCP3Q96CW5 907 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 ARL5BQ96KC2 179 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 ZIM3Q96PE6 472 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 TNFRSF13CQ96RJ3 184 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 AMBRA1Q9C0C7 1298 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 SAP130Q9H0E3 1048 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 OR51I1Q9H343 314 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 EXOSC3Q9NQT5 275 aaKnown RBP11.51□□□□□ -0.57
TPM1-220ENST00000559556 CTPS2Q9NRF8 586 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 POLE3Q9NRF9 147 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 TMEM160Q9NX00 188 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 NOP53Q9NZM5 478 aaKnown RBP11.51□□□□□ -0.57
TPM1-220ENST00000559556 LGALS13Q9UHV8 139 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 POU2F3Q9UKI9 436 aa11.51□□□□□ -0.57
TPM1-220ENST00000559556 CCT8L1PA6NM43 557 aa11.5□□□□□ -0.57
TPM1-220ENST00000559556 BCAS1O75363 584 aaPredicted RBP11.5□□□□□ -0.57
TPM1-220ENST00000559556 AGR2O95994 175 aa11.5□□□□□ -0.57
TPM1-220ENST00000559556 TFPIP10646 304 aa11.5□□□□□ -0.57
TPM1-220ENST00000559556 FKBP2P26885 142 aaKnown RBP11.5□□□□□ -0.57
TPM1-220ENST00000559556 CLK1P49759 484 aaKnown RBP11.5□□□□□ -0.57
TPM1-220ENST00000559556 H3F3AP84243 136 aa11.5□□□□□ -0.57
TPM1-220ENST00000559556 EMX2Q04743 252 aa11.5□□□□□ -0.57
TPM1-220ENST00000559556 FUT5Q11128 374 aa11.5□□□□□ -0.57
TPM1-220ENST00000559556 GABRA6Q16445 453 aa11.5□□□□□ -0.57
TPM1-220ENST00000559556 ZNF544Q6NX49 715 aa11.5□□□□□ -0.57
TPM1-220ENST00000559556 EMBQ6PCB8 327 aa11.5□□□□□ -0.57
TPM1-220ENST00000559556 FRRS1Q6ZNA5 592 aa11.5□□□□□ -0.57
TPM1-220ENST00000559556 ZNF525Q8N782 197 aa11.5□□□□□ -0.57
TPM1-220ENST00000559556 TCP10LQ8TDR4 215 aa11.5□□□□□ -0.57
TPM1-220ENST00000559556 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.5□□□□□ -0.57
TPM1-220ENST00000559556 MUS81Q96NY9 551 aa11.5□□□□□ -0.57
TPM1-220ENST00000559556 DCTN4Q9UJW0 460 aa11.5□□□□□ -0.57
TPM1-220ENST00000559556 WDR45Q9Y484 360 aa11.5□□□□□ -0.57
TPM1-220ENST00000559556 TLDC2A0PJX2 215 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 PHF1O43189 567 aaPredicted RBP11.49□□□□□ -0.57
TPM1-220ENST00000559556 SCN2BO60939 215 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 SPAG7O75391 227 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 MRPL33O75394 65 aaKnown RBP11.49□□□□□ -0.57
TPM1-220ENST00000559556 NUDT17P0C025 328 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 CASP9P55211 416 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 FOXG1P55316 489 aaPredicted RBP11.49□□□□□ -0.57
TPM1-220ENST00000559556 CHRNEQ04844 493 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 RAB35Q15286 201 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 C1QTNF12Q5T7M4 302 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 ATAD3BQ5T9A4 648 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 ADGRG3Q86Y34 549 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 DEPDC4Q8N2C3 294 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 C1orf162Q8NEQ5 155 aaPredicted RBP11.49□□□□□ -0.57
TPM1-220ENST00000559556 OR4A15Q8NGL6 344 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 ZNF563Q8TA94 476 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 C10orf105Q8TEF2 133 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 NANOS1Q8WY41 292 aaKnown RBP11.49□□□□□ -0.57
TPM1-220ENST00000559556 FAM168AQ92567 244 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 ROPN1LQ96C74 230 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 INPP5KQ9BT40 448 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms