RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 MSX2P35548 267 aaPredicted RBP10.24□□□□□ -0.77
SNX1-204ENST00000559061 PON3Q15166 354 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 ZNF239Q16600 458 aaKnown RBP10.24□□□□□ -0.77
SNX1-204ENST00000559061 CYBRD1Q53TN4 286 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 SYT14P1Q58G82 188 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 HIST2H2BCQ6DN03 193 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 C3orf33Q6P1S2 294 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 ESPNLQ6ZVH7 1005 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 ZNF550Q7Z398 422 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 VTCN1Q7Z7D3 282 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 MRGPRGQ86SM5 289 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 DEFB107AQ8IZN7 70 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 CADM2Q8N3J6 435 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 ZNF808Q8N4W9 903 aaPredicted RBP10.24□□□□□ -0.77
SNX1-204ENST00000559061 LSMEM1Q8N8F7 131 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 ZNF563Q8TA94 476 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 TMEM234Q8WY98 164 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 WNT2BQ93097 391 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 SLC7A6OSQ96CW6 309 aaPredicted RBP10.24□□□□□ -0.77
SNX1-204ENST00000559061 DTNBP1Q96EV8 351 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 PTDSS2Q9BVG9 487 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 SPATA5L1Q9BVQ7 753 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 UCK2Q9BZX2 261 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 PCDHAC1Q9H158 963 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 RNF122Q9H9V4 155 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 CHRNA9Q9UGM1 479 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 EGFL7Q9UHF1 273 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 ZNF232Q9UNY5 417 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 SPTBN1Q01082 2364 aaKnown RBP10.24□□□□□ -0.77
SNX1-204ENST00000559061 IGHV3-15A0A0B4J1V0 119 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 A1L4Q6 167 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 B2RBV5 119 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 SMAD9O15198 467 aaKnown RBP10.23□□□□□ -0.77
SNX1-204ENST00000559061 FZD7O75084 574 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 RCBTB2O95199 551 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 C8BP07358 591 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 ESRRAP11474 423 aaPredicted RBP10.23□□□□□ -0.77
SNX1-204ENST00000559061 CCNA2P20248 432 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 AGAP20933 346 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 ENPP1P22413 925 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 HTR1EP28566 365 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 GCKP35557 465 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 APOBEC1P41238 236 aaKnown RBP10.23□□□□□ -0.77
SNX1-204ENST00000559061 EIF1AXP47813 144 aaKnown RBP10.23□□□□□ -0.77
SNX1-204ENST00000559061 POLR2HP52434 150 aaKnown RBP10.23□□□□□ -0.77
SNX1-204ENST00000559061 AGFG1P52594 562 aaKnown RBP10.23□□□□□ -0.77
SNX1-204ENST00000559061 RGS8P57771 180 aaPredicted RBP10.23□□□□□ -0.77
SNX1-204ENST00000559061 MYBPHQ13203 477 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 ZSWIM7Q19AV6 140 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 LRRC23Q53EV4 343 aaPredicted RBP10.23□□□□□ -0.77
SNX1-204ENST00000559061 INTS11Q5TA45 600 aaKnown RBP10.23□□□□□ -0.77
SNX1-204ENST00000559061 HBMQ6B0K9 141 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 WBP2NLQ6ICG8 309 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 GCNT2Q8N0V5 402 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 MEIOBQ8N635 442 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 ACBD4Q8NC06 268 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 VANGL1Q8TAA9 524 aaPredicted RBP10.23□□□□□ -0.77
SNX1-204ENST00000559061 ROBO4Q8WZ75 1007 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 RND1Q92730 232 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 OSTF1Q92882 214 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 SDCCAG3Q96C92 435 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 CDRT15Q96T59 188 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 KCTD14Q9BQ13 255 aaPredicted RBP10.23□□□□□ -0.77
SNX1-204ENST00000559061 NPDC1Q9NQX5 325 aaPredicted RBP10.23□□□□□ -0.77
SNX1-204ENST00000559061 TAS2R1Q9NYW7 299 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 TESQ9UGI8 421 aaKnown RBP10.23□□□□□ -0.77
SNX1-204ENST00000559061 AP3M1Q9Y2T2 418 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 ZNF175Q9Y473 711 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 SNX13Q9Y5W8 968 aa10.23□□□□□ -0.77
SNX1-204ENST00000559061 NKX2-6A6NCS4 301 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 SLC22A20A6NK97 555 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 FTCDNL1E5RQL4 147 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 ZNF208O43345 1280 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 SEMG1P04279 462 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 PTNP21246 168 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 ATP6V1B2P21281 511 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 CALB2P22676 271 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 EDNRAP25101 427 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 KIR2DL2P43627 348 aaPredicted RBP10.22□□□□□ -0.77
SNX1-204ENST00000559061 OR1E2P47887 323 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 DIO1P49895 249 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 P2RY4P51582 365 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 CDH12P55289 794 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 OR1Q1Q15612 314 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 IQCCQ4KMZ1 466 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 ABLIM2Q6H8Q1 611 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 TMEM211Q6ICI0 200 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 VWA1Q6PCB0 445 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 LINC00114Q6XXX2 140 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 CBLL1Q75N03 491 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 CARM1Q86X55 608 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 P3H2Q8IVL5 708 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 LILRB4Q8NHJ6 448 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 RNF128Q8TEB7 428 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 ABHD3Q8WU67 409 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 INTS12Q96CB8 462 aaKnown RBP10.22□□□□□ -0.77
SNX1-204ENST00000559061 CLPTM1LQ96KA5 538 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 OR5B2Q96R09 309 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 MCHR1Q99705 422 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 PRSS27Q9BQR3 290 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms