RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 MCFD2Q8NI22 146 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 ITLN2Q8WWU7 325 aaPredicted RBP9.41□□□□□ -0.9
TPM1-212ENST00000558347 ASB15Q8WXK1 588 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 GGHQ92820 318 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 SENP5Q96HI0 755 aaPredicted RBP9.41□□□□□ -0.9
TPM1-212ENST00000558347 DGAT2Q96PD7 388 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 DCSTAMPQ9H295 470 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 DSN1Q9H410 356 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 SP140LQ9H930 580 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 A4GALTQ9NPC4 353 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 HPF1Q9NWY4 346 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 ZNF226Q9NYT6 803 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 ZNF835Q9Y2P0 537 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 SNX8Q9Y5X2 465 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 PINLYPA6NC86 204 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 KLRC4-KLRK1H3BQV0 150 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 BOLA2-SMG1P6H3BVE0 249 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 PLOD3O60568 738 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 GADD45GO95257 159 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 OXSR1O95747 527 aaPredicted RBP9.41□□□□□ -0.9
TPM1-212ENST00000558347 IFNW1P05000 195 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 AQP1P29972 269 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 PTGER1P34995 402 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 SOX18P35713 384 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 NR0B1P51843 470 aaKnown RBP9.41□□□□□ -0.9
TPM1-212ENST00000558347 CDH12P55289 794 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 CDC42P60953 191 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 MGAT2Q10469 447 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 CBX3Q13185 183 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 ZNF181Q2M3W8 571 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.41□□□□□ -0.99e-6■■■■□ 24.9
TPM1-212ENST00000558347 PRICKLE4Q2TBC4 344 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 TIMM50Q3ZCQ8 353 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 REEP3Q6NUK4 255 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 TMEM107Q6UX40 140 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 Q6ZPB1 254 aaPredicted RBP9.41□□□□□ -0.9
TPM1-212ENST00000558347 PLEKHG7Q6ZR37 379 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 FGD2Q7Z6J4 655 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 ZBTB46Q86UZ6 589 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 RNF130Q86XS8 419 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 SLC44A2Q8IWA5 706 aaPredicted RBP9.41□□□□□ -0.9
TPM1-212ENST00000558347 GHDCQ8N2G8 530 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 ZFP62Q8NB50 900 aaPredicted RBP9.41□□□□□ -0.9
TPM1-212ENST00000558347 POGLUT1Q8NBL1 392 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 PSD4Q8NDX1 1056 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 C16orf52Q8NHV5 167 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 CTHRC1Q96CG8 243 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 RBM18Q96H35 190 aaKnown RBP9.41□□□□□ -0.9
TPM1-212ENST00000558347 RHNO1Q9BSD3 238 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 CDCA4Q9BXL8 241 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 ZCCHC3Q9NUD5 404 aaKnown RBP9.41□□□□□ -0.9
TPM1-212ENST00000558347 ACER3Q9NUN7 267 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 IMPAD1Q9NX62 359 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 COPS7AQ9UBW8 275 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 AASSQ9UDR5 926 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 C19orf53Q9UNZ5 99 aaPredicted RBP9.41□□□□□ -0.9
TPM1-212ENST00000558347 EML6Q6ZMW3 1958 aa9.4□□□□□ -0.9
TPM1-212ENST00000558347 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 A0A0G2JMM0 328 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 A0A1W2PPB8 328 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 A0A1W2PRS3 328 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 ZAR1LA6NP61 321 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 KIR3DP1A8MWS1 328 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 G3V3Y1 287 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 TFECO14948 347 aaPredicted RBP9.4□□□□□ -0.91
TPM1-212ENST00000558347 ADAP00813 363 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 CLPSP04118 112 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 LIPAP38571 399 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 MC3RP41968 323 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 ANXA11P50995 505 aaKnown RBP9.4□□□□□ -0.91
TPM1-212ENST00000558347 SMIM11AP58511 58 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 LSM3P62310 102 aaKnown RBP9.4□□□□□ -0.91
TPM1-212ENST00000558347 ADORA2A-AS1P86434 159 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 ZNF45Q02386 682 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 PRKCDQ05655 676 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 KRR1Q13601 381 aaKnown RBP9.4□□□□□ -0.91
TPM1-212ENST00000558347 LTB4RQ15722 352 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 TMEM236Q5W0B7 351 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 ANGPTL8Q6UXH0 198 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 NCCRP1Q6ZVX7 275 aaPredicted RBP9.4□□□□□ -0.91
TPM1-212ENST00000558347 CCDC103Q8IW40 242 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 GPALPP1Q8IXQ4 340 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 STX19Q8N4C7 294 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 OR7G2Q8NG99 324 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 OR5L2Q8NGL0 311 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 RASSF5Q8WWW0 418 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 KAT2AQ92830 837 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 UBE2FQ969M7 185 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 GIMAP5Q96F15 307 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 SLC35G5Q96KT7 338 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 DHRS1Q96LJ7 313 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 CLN6Q9NWW5 311 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 MAT2BQ9NZL9 334 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 ITGB1BP2Q9UKP3 347 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 PAIP2BQ9ULR5 123 aaKnown RBP9.4□□□□□ -0.91
TPM1-212ENST00000558347 MGAT4BQ9UQ53 548 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 ERVK-19Q9WJR5 959 aa9.4□□□□□ -0.91
TPM1-212ENST00000558347 NCOA6Q14686 2063 aaPredicted RBP9.39□□□□□ -0.91
TPM1-212ENST00000558347 GTF3C1Q12789 2109 aa9.39□□□□□ -0.91
TPM1-212ENST00000558347 TMEM247A6NEH6 219 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms