RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 GRIP2Q9C0E4 1043 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 CENPHQ9H3R5 247 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 MTHFD2LQ9H903 347 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 KCNK9Q9NPC2 374 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 ASB6Q9NWX5 421 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 BTNL2Q9UIR0 455 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 MGAT4BQ9UQ53 548 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 TRAPPC4Q9Y296 219 aa12.04□□□□□ -0.48
SNRPA1-204ENST00000558020 FREM1Q5H8C1 2179 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 CSPG4Q6UVK1 2322 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 OR5H1A6NKK0 313 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 INAFM1C9JVW0 142 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 E9PBE3 544 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 EIF1BO60739 113 aaKnown RBP12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 SCN2BO60939 215 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 PGM3O95394 542 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 SOD3P08294 240 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 COX5AP20674 150 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 IGHV1-2P23083 117 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 MAPK14Q16539 360 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 FAM174BQ3ZCQ3 159 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 AGAP6Q5VW22 663 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 SPATA19Q7Z5L4 167 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 ZNF433Q8N7K0 673 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 FAM71CQ8NEG0 241 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 DDIT4LQ96D03 193 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 PANX1Q96RD7 426 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 ZBTB18Q99592 522 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 NAA11Q9BSU3 229 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 REG4Q9BYZ8 158 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 NUF2Q9BZD4 464 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 CTPS2Q9NRF8 586 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 TMEM181Q9P2C4 612 aa12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 FN1P02751 2386 aaKnown RBP12.03□□□□□ -0.48
SNRPA1-204ENST00000558020 CCDC154A6NI56 674 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 RNF223E7ERA6 249 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 ABCD4O14678 606 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 BMP4P12644 408 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 IL7RP16871 459 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 PTAFRP25105 342 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 IDH2P48735 452 aaKnown RBP12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 OR2B6P58173 313 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 PHC1P78364 1004 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 SLC35A1P78382 337 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 TGFBR3Q03167 851 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 CHRNEQ04844 493 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 FAPQ12884 760 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 NRF1Q16656 503 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 SPANXN4Q5MJ08 99 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 C1QTNF12Q5T7M4 302 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 HHATQ5VTY9 493 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 OGFOD2Q6N063 350 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 FRRS1Q6ZNA5 592 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 ZNF621Q6ZSS3 439 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 ADGRG3Q86Y34 549 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 KBTBD8Q8NFY9 601 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 ZG16BQ96DA0 208 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 ADAD1Q96M93 576 aaKnown RBP12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 CCDC115Q96NT0 180 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 OR52E6Q96RD3 313 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 PAIP2Q9BPZ3 127 aaKnown RBP12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 MEAF6Q9HAF1 191 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 TAS2R16Q9NYV7 291 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 HAO1Q9UJM8 370 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 POU2F3Q9UKI9 436 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 MAGED1Q9Y5V3 778 aaPredicted RBP12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 PRR14LQ5THK1 2151 aa12.02□□□□□ -0.49
SNRPA1-204ENST00000558020 CENPVL1A0A0U1RR11 272 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 AGAP5A6NIR3 686 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 TRPC5OSA6NMA1 111 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 HMGN4O00479 90 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 ZNF208O43345 1280 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 RAMP1O60894 148 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 KRT75O95678 551 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 DBIP07108 87 aaKnown RBP12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 DHRS4L1P0CG22 281 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 NR2F1P10589 423 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 CCNA2P20248 432 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 CDKN1AP38936 164 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 SLC1A3P43003 542 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 POLR2HP52434 150 aaKnown RBP12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 SLC16A1P53985 500 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 CDH11P55287 796 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 DMTNQ08495 405 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 GSTA3Q16772 222 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 PGGHGQ32M88 737 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 ABLIM2Q6H8Q1 611 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 SLC22A25Q6T423 547 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 OLIG3Q7RTU3 272 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 RNF130Q86XS8 419 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 ZNF440Q8IYI8 595 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 NEUROG1Q92886 237 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 SORT1Q99523 831 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 RHNO1Q9BSD3 238 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 C20orf27Q9GZN8 174 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 SLCO5A1Q9H2Y9 848 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 UPB1Q9UBR1 384 aa12.01□□□□□ -0.49
SNRPA1-204ENST00000558020 TMED7-TICAM2A0A0A6YYA0 188 aa12□□□□□ -0.49
SNRPA1-204ENST00000558020 FAM234BA2RU67 622 aa12□□□□□ -0.49
SNRPA1-204ENST00000558020 CFAP73A6NFT4 308 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms