RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 TSPYL1Q9H0U9 437 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 FBXO44Q9H4M3 255 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 ISG20L2Q9H9L3 353 aaKnown RBP2.67□□□□□ -1.98
VRK1-207ENST00000557352 DMAP1Q9NPF5 467 aaPredicted RBP2.67□□□□□ -1.98
VRK1-207ENST00000557352 GDF3Q9NR23 364 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 MARCH5Q9NX47 278 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 TMEM9Q9P0T7 183 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 MTRRQ9UBK8 725 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 STAP1Q9ULZ2 295 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 SCML2Q9UQR0 700 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 PLXNA2O75051 1894 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 CLUHO75153 1309 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 TRPM6Q9BX84 2022 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 PLXND1Q9Y4D7 1925 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 ARID1AO14497 2285 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 TNRC18O15417 2968 aaPredicted RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 ATG2BQ96BY7 2078 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 DOCK9Q9BZ29 2069 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 hCG_1818297A0A087WSY0 165 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 CXorf51AA0A1B0GTR3 108 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 MYBPHLA2RUH7 354 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 LRRD1A4D1F6 860 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 EFCAB7A8K855 629 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 C5orf67F2Z3F1 127 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 F8VP50 259 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 APOC4-APOC2K7ER74 178 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 SLC7A4O43246 635 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 KIAA0513O60268 411 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 ERLIN1O75477 346 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 DUSP14O95147 198 aaKnown RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 GJB5O95377 273 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 GAS8O95995 478 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 ACTL6AO96019 429 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 APOC2P02655 101 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 FGGP02679 453 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 ZDHHC11BP0C7U3 371 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 SLC2A3P11169 496 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 CCDC130P13994 396 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 CPN1P15169 458 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 PSMA2P25787 234 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 MIPP30301 263 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 SDC4P31431 198 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 STIP1P31948 543 aaKnown RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 CTNNB1P35222 781 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 RDXP35241 583 aaKnown RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 CDKN2BP42772 138 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 MARCKSL1P49006 195 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 SLC11A1P49279 550 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 CCR4P51679 360 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 RPL10AP62906 217 aaKnown RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 OGDHQ02218 1023 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 CAV1Q03135 178 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 ADIGQ0VDE8 80 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 XRCC4Q13426 336 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 TFDP2Q14188 446 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 SLMAPQ14BN4 828 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 MORF4L2Q15014 288 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 MICAQ29983 383 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 LRRC26Q2I0M4 334 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 CCDC14Q49A88 953 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 BRMS1LQ5PSV4 323 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 BEND6Q5SZJ8 279 aaPredicted RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 FAM219BQ5XKK7 198 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 DUPD1Q68J44 220 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 IYDQ6PHW0 289 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 C4orf22Q6V702 233 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 TIFABQ6ZNK6 161 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 BZW1Q7L1Q6 419 aaKnown RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 UNC45BQ8IWX7 931 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 AQP12AQ8IXF9 295 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 IFT20Q8IY31 132 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 NUP93Q8N1F7 819 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 ARHGAP18Q8N392 663 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 FBXW8Q8N3Y1 598 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 C10orf53Q8N6V4 93 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 PRELID2Q8N945 189 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 BBOF1Q8ND07 529 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 CHDHQ8NE62 594 aaPredicted RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 OR10T2Q8NGX3 314 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 PSMA8Q8TAA3 256 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 JOSD2Q8TAC2 188 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 FIBINQ8TAL6 211 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 AENQ8WTP8 325 aaKnown RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 RXFP2Q8WXD0 754 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 FAM104AQ969W3 186 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 MYLPFQ96A32 169 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 MRPL24Q96A35 216 aaKnown RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 PNPLA2Q96AD5 504 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 SLCO4A1Q96BD0 722 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 ULK4Q96C45 1275 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 AP2M1Q96CW1 435 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 FAM122AQ96E09 287 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 CFAP36Q96G28 342 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 PIWIL1Q96J94 861 aaKnown RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 RASL10BQ96S79 203 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 ZNF559Q9BR84 538 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 PARD6BQ9BYG5 372 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 OSBPL8Q9BZF1 889 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 GOLPH3Q9H4A6 298 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 CWH43Q9H720 699 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms