RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ERVFC1P60507 584 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 FJX1Q86VR8 437 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 COPS3Q9UNS2 423 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 NAV1Q8NEY1 1877 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 TNFRSF10AO00220 468 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 CBLP22681 906 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 CD81P60033 236 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 PCLAFQ15004 111 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 SFRP4Q6FHJ7 346 aaPredicted RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 CDH26Q8IXH8 852 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 ZBTB20Q9HC78 741 aaPredicted RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 FBXL12Q9NXK8 326 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 NIPSNAP2O75323 286 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 BEX3Q00994 111 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 RBPJQ06330 500 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 OR5M3Q8NGP4 307 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 CIB3Q96Q77 187 aaPredicted RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 ENPP4Q9Y6X5 453 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 C9JVG2 144 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 ETV4P43268 484 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 C15orf52Q6ZUT6 534 aaKnown RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 ST6GALNAC5Q9BVH7 336 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 KCNQ2O43526 872 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 OR12D1P0DN82 309 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 ACP5P13686 325 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF8P17098 575 aaPredicted RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 MGAT3Q09327 533 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 SIRPB2Q5JXA9 342 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 C6orf136Q5SQH8 315 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF561Q8N587 486 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 AKT1S1Q96B36 256 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 DCAF16Q9NXF7 216 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 TMEM72A0PK05 275 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 MCRIP1C9JLW8 97 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 SCAMP2O15127 329 aaKnown RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 B4GALT2O60909 372 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 MAP2K6P52564 334 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 SNRPD2P62316 118 aaKnown RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 AADACL3Q5VUY0 350 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 UQCC3Q6UW78 93 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 PXYLP1Q8TE99 480 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 RBPMSQ93062 196 aaKnown RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 MMABQ96EY8 250 aaPredicted RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 HERPUD2Q9BSE4 406 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 PARP4Q9UKK3 1724 aaKnown RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 IGHG1P01857 330 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 BCL6P41182 706 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 DHPSP49366 369 aaPredicted RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 FIBINQ8TAL6 211 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 RASD2Q96D21 266 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 HSD17B14Q9BPX1 270 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 HIDE1A8MVS5 230 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 YKT6O15498 198 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 EFNA1P20827 205 aaPredicted RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 SOX10P56693 466 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 KIAA0141Q14154 515 aaPredicted RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 C3orf38Q5JPI3 329 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 OTUD1Q5VV17 481 aaPredicted RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 PDZD3Q86UT5 571 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 OR10Z1Q8NGY1 313 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 WDR20Q8TBZ3 569 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 LCATP04180 440 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 BIDP55957 195 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 COMMD1Q8N668 190 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 CLDN24A6NM45 220 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 MPIG6BO95866 241 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 SFTPDP35247 375 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 IRF9Q00978 393 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 PLPP4Q5VZY2 271 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 CLDN22Q8N7P3 220 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 ZFP90Q8TF47 636 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 SH3YL1Q96HL8 342 aaPredicted RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 SLC29A1Q99808 456 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 SLC9B1P1A6NJY1 282 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 ANHXE9PGG2 379 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 GABRA4P48169 554 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 HIST1H3AP68431 136 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 GRM2Q14416 872 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 HENMT1Q5T8I9 393 aaKnown RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 LMNTD1Q8N9Z9 388 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 OR13C8Q8NGS7 320 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 UCN3Q969E3 161 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 AKAP12Q02952 1782 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 MDC1Q14676 2089 aaKnown RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 B4GALT5O43286 388 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 PSMB1P20618 241 aaKnown RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 CLDN8P56748 225 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 SFT2D3Q587I9 215 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 EIF4E3Q8N5X7 224 aaKnown RBP8.31□□□□□ -1.08
SYNE3-205ENST00000557275 SLC35G3Q8N808 338 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 OR5H6Q8NGV6 325 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 OR51A7Q8NH64 312 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 PDCD1LG2Q9BQ51 273 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 ENKD1Q9H0I2 346 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 B4DGG1 531 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 MPC1LP0DKB6 136 aa8.31□□□□□ -1.08
SYNE3-205ENST00000557275 HLA-DMAP28067 261 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms