RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 GUSBP08236 651 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 CSF3P09919 207 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 BCKDHAP12694 445 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 CPA3P15088 417 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 SLC25A16P16260 332 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 PTAFRP25105 342 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 TTKP33981 857 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 HPCAL1P37235 193 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 GDNFP39905 211 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 CCT3P49368 545 aaKnown RBP7.64□□□□□ -1.19
VRK1-206ENST00000557222 CDH11P55287 796 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 CSNK2A1P68400 391 aaPredicted RBP7.64□□□□□ -1.19
VRK1-206ENST00000557222 VLDLRP98155 873 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 FAPQ12884 760 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 CBFBQ13951 182 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 LASP1Q14847 261 aaKnown RBP7.64□□□□□ -1.19
VRK1-206ENST00000557222 TSC22D1Q15714 1073 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 LSM12Q3MHD2 195 aaKnown RBP7.64□□□□□ -1.19
VRK1-206ENST00000557222 RFTN2Q52LD8 501 aaPredicted RBP7.64□□□□□ -1.19
VRK1-206ENST00000557222 DCST2Q5T1A1 773 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 C6orf52Q5T4I8 152 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 CCNJQ5T5M9 372 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 AP1ARQ63HQ0 302 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 ANKRD26P1Q6NSI1 321 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 C3orf33Q6P1S2 294 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 BHLHB9Q6PI77 547 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 KLHL17Q6TDP4 642 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 CLEC2AQ6UVW9 174 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 CBLN3Q6UW01 205 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 TMEM108Q6UXF1 575 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 SZRD1Q7Z422 152 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 IFT20Q8IY31 132 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 ZNF433Q8N7K0 673 aaPredicted RBP7.64□□□□□ -1.19
VRK1-206ENST00000557222 SFXN5Q8TD22 340 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 SLC25A43Q8WUT9 341 aaPredicted RBP7.64□□□□□ -1.19
VRK1-206ENST00000557222 ST8SIA1Q92185 356 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 JADE3Q92613 823 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 ZNF75CPQ92670 426 aaPredicted RBP7.64□□□□□ -1.19
VRK1-206ENST00000557222 PROX1Q92786 737 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 NEUROG1Q92886 237 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 CDS1Q92903 461 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 TSSK3Q96PN8 268 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 TNFRSF13CQ96RJ3 184 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 DHRS9Q9BPW9 319 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 KLHDC3Q9BQ90 382 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 NMUR2Q9GZQ4 415 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 LAT2Q9GZY6 243 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 CXorf36Q9H7Y0 433 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 SERINC1Q9NRX5 453 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 CBLN4Q9NTU7 201 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 ATAD3AQ9NVI7 634 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 EMC3Q9P0I2 261 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 FAF1Q9UNN5 650 aaPredicted RBP7.64□□□□□ -1.19
VRK1-206ENST00000557222 CARD8Q9Y2G2 431 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.64□□□□□ -1.19
VRK1-206ENST00000557222 YLPM1P49750 1951 aaKnown RBP7.63□□□□□ -1.19
VRK1-206ENST00000557222 DUXAA6NLW8 204 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 H7C417 338 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 GPR171O14626 319 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 ABCD4O14678 606 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 SCAMP2O15127 329 aaKnown RBP7.63□□□□□ -1.19
VRK1-206ENST00000557222 SMAD9O15198 467 aaKnown RBP7.63□□□□□ -1.19
VRK1-206ENST00000557222 DNPH1O43598 174 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 SSX4O60224 188 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 RAMP1O60894 148 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 LYZL6O75951 148 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 DHRS4L1P0CG22 281 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 UBL4AP11441 157 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 IGHV1-2P23083 117 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 CLK1P49759 484 aaKnown RBP7.63□□□□□ -1.19
VRK1-206ENST00000557222 NUDT6P53370 316 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 C21orf58P58505 322 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 RPL38P63173 70 aaKnown RBP7.63□□□□□ -1.19
VRK1-206ENST00000557222 TP53BP2Q13625 1128 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 TOMM34Q15785 309 aaPredicted RBP7.63□□□□□ -1.19
VRK1-206ENST00000557222 ZNF141Q15928 474 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 TMEM249Q2WGJ8 235 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.63□□□□□ -1.19
VRK1-206ENST00000557222 FBXW9Q5XUX1 488 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 KANK2Q63ZY3 851 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 CLEC6AQ6EIG7 209 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 OR7E24Q6IFN5 339 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 C11orf71Q6IPW1 123 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 ZNF544Q6NX49 715 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 TMPPEQ6ZT21 453 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 MTDHQ86UE4 582 aaKnown RBP7.63□□□□□ -1.19
VRK1-206ENST00000557222 ZNF100Q8IYN0 542 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 FBXL14Q8N1E6 418 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 ZNF619Q8N2I2 560 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 CEP112Q8N8E3 955 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 OR2T11Q8NH01 316 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 FBXO30Q8TB52 745 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 TMEM234Q8WY98 164 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 COQ8BQ96D53 544 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 PPP3R2Q96LZ3 170 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 MUS81Q96NY9 551 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 PRPF18Q99633 342 aaKnown RBP7.63□□□□□ -1.19
VRK1-206ENST00000557222 TXLNGYQ9BZA5 131 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 TUBB1Q9H4B7 451 aa7.63□□□□□ -1.19
VRK1-206ENST00000557222 GPATCH2Q9NW75 528 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms