RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 ZGLP1P0C6A0 271 aa16.08■□□□□ 0.16
PTPN21-208ENST00000556564 BMP2P12643 396 aa16.08■□□□□ 0.16
PTPN21-208ENST00000556564 HTR5AP47898 357 aa16.08■□□□□ 0.16
PTPN21-208ENST00000556564 LEXMQ3ZCV2 418 aa16.08■□□□□ 0.16
PTPN21-208ENST00000556564 ZNF845Q96IR2 970 aaPredicted RBP16.08■□□□□ 0.16
PTPN21-208ENST00000556564 PRR14Q9BWN1 585 aa16.08■□□□□ 0.16
PTPN21-208ENST00000556564 ZNF223Q9UK11 482 aaPredicted RBP16.08■□□□□ 0.16
PTPN21-208ENST00000556564 NPFFR2Q9Y5X5 522 aa16.08■□□□□ 0.16
PTPN21-208ENST00000556564 HSPE1-MOB4S4R3N1 261 aa16.08■□□□□ 0.16
PTPN21-208ENST00000556564 SCGNO76038 276 aa16.08■□□□□ 0.16
PTPN21-208ENST00000556564 T-ENOLP0DO92 83 aa16.08■□□□□ 0.16
PTPN21-208ENST00000556564 MAVSQ7Z434 540 aa16.08■□□□□ 0.16
PTPN21-208ENST00000556564 SLC25A44Q96H78 314 aaPredicted RBP16.08■□□□□ 0.16
PTPN21-208ENST00000556564 LINC00615Q96LM1 132 aaPredicted RBP16.08■□□□□ 0.16
PTPN21-208ENST00000556564 MAGEA2P43356 314 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 SP7Q8TDD2 431 aaPredicted RBP16.07■□□□□ 0.16
PTPN21-208ENST00000556564 PCED1AQ9H1Q7 454 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 A4GALTQ9NPC4 353 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 GMPR2Q9P2T1 348 aaKnown RBP16.07■□□□□ 0.16
PTPN21-208ENST00000556564 FBXL3Q9UKT7 428 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 TRIP12Q14669 1992 aaPredicted RBP16.07■□□□□ 0.16
PTPN21-208ENST00000556564 TRBV5-4A0A0C4DH59 114 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 DNAJB5O75953 348 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 CSF2P04141 144 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 UCHL1P09936 223 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 AQP2P41181 271 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 PCBD1P61457 104 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 OR5L1Q8NGL2 311 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 TSPAN10Q9H1Z9 355 aaPredicted RBP16.07■□□□□ 0.16
PTPN21-208ENST00000556564 TUBB1Q9H4B7 451 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 BIDP55957 195 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 MZB1Q8WU39 189 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 NGBQ9NPG2 151 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 MRPL15Q9P015 296 aaKnown RBP16.07■□□□□ 0.16
PTPN21-208ENST00000556564 KLHL9Q9P2J3 617 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 POMT2Q9UKY4 750 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 CNOT4O95628 575 aaKnown RBP16.07■□□□□ 0.16
PTPN21-208ENST00000556564 MAGEA12P43365 314 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 FAM57BQ71RH2 274 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 CHST8Q9H2A9 424 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 MED20Q9H944 212 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 SCP2D1Q9UJQ7 156 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 PRRC2BQ5JSZ5 2229 aaKnown RBP16.07■□□□□ 0.16
PTPN21-208ENST00000556564 TRAV36DV7A0A075B6V5 113 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 H0YIG0 161 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 CELA2BP08218 269 aaPredicted RBP16.07■□□□□ 0.16
PTPN21-208ENST00000556564 HOXB9P17482 250 aaPredicted RBP16.07■□□□□ 0.16
PTPN21-208ENST00000556564 RGS6P49758 472 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 DUSP5Q16690 384 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 PGGHGQ32M88 737 aa16.07■□□□□ 0.16
PTPN21-208ENST00000556564 CWF19L1Q69YN2 538 aaKnown RBP16.07■□□□□ 0.16
PTPN21-208ENST00000556564 PTHP01270 115 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 BCKDHBP21953 392 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 C3orf33Q6P1S2 294 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 MOB3CQ70IA8 216 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 TMEM255BQ8WV15 326 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 TEX37Q96LM6 180 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 NECAB3Q96P71 396 aaPredicted RBP16.06■□□□□ 0.16
PTPN21-208ENST00000556564 KATNB1Q9BVA0 655 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 FOCADQ5VW36 1801 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 DCDC2BA2VCK2 349 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 CLCA1A8K7I4 914 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 PPM1DO15297 605 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 STK17BO94768 372 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 SLC6A12P48065 614 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 KCNE4Q8WWG9 221 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 SGPP1Q9BX95 441 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 MTHFD2P13995 350 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 EDN3P14138 238 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 PITPNBP48739 271 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 PPIAP62937 165 aaKnown RBP16.06■□□□□ 0.16
PTPN21-208ENST00000556564 CYHR1Q6ZMK1 362 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 PIGCQ92535 297 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 ISL2Q96A47 359 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 AASSQ9UDR5 926 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 HMX2A2RU54 273 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 TMPRSS11DO60235 418 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 PEX11BO96011 259 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 RFC3P40938 356 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 BCORP1Q8N888 145 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 SLC41A2Q96JW4 573 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 TNFRSF13CQ96RJ3 184 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 LRFN1Q9P244 771 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 ABCD2Q9UBJ2 740 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 MGAT4AQ9UM21 535 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 PPT2Q9UMR5 302 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 MT-CO3P00414 261 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 GASTP01350 101 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 RAB3AP20336 220 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 ZNF704Q6ZNC4 412 aaPredicted RBP16.06■□□□□ 0.16
PTPN21-208ENST00000556564 ISOC1Q96CN7 298 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 SLC25A18Q9H1K4 315 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 SATB2Q9UPW6 733 aa16.06■□□□□ 0.16
PTPN21-208ENST00000556564 TRAV6A0A075B6T7 132 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 RAB3BP20337 219 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 MYF6P23409 242 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 TRIP6Q15654 476 aaKnown RBP16.05■□□□□ 0.16
PTPN21-208ENST00000556564 C4orf36Q96KX1 117 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 GABRG3Q99928 467 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 SCN1AP35498 2009 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms